LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lal12g1568	ATGAAGAGTTCGATGAAGAAGATGTCTGGGGTGTGGCCAAGGAGAGGGACTATTCAACCTAAAAAACAAGGGTATCTAAGGACTCTTCTGAGTTGTGGTTTTTCGATTAGACGAGGTCACACCTACAAACATAGCAAGAATAATGTCGATGATATTTACAAAAGAGAGTATATTTGTCACCGTGCTGGTATTTCTAAACAACAAAAAGTTGTTGAATTAGAAAGACAAAGGAGACGGAAAAGTTCAAGATGTAAGTGTAGCGCAAAGTTAATTATTACTAAAAGAACAATTGGCTTTGAGGAACGTTGGGTGATCACATATTTTAGTAATTCTCATAACCATACATTATTGGACAACAAAGAGGTTCATTTTCTTCCTGCTTATCGTGACATACCTATCAATGATCAAGGTCGCATATTACTACTATCAAAAGTTGGATGTTCGATAAGTATTATAATGAGGGTGCTTGAATTGGAAAAGGGGATAGAGGCGGGCCTTCTACCATTTTTAGAAAAAGACATTAGAAATTTTCTTCAATCTCACAGTAATGCTGGTAAAGATAACGATGCTTCAGAGACCAATGTTCTCAGGACTGGTCAGACATTCTGCTTTCTCCCACTGCCTATTAGAACTGGACTTAGTGTAAAAGTCAACGGATTCTTTGAGGTCTCATCAAATGTCTGTGGCATTTGGTATGGAGATGACATAGACAAAAGTGGAAAAGTTCGTTCTAACTGGAATACGCTTTTTCTGGAAGATGTTGTTGCTCATGTTTTTATGCATATGCTGCTTGGTGTGAAACGTAGACAACAGTGTTGGGACTGGATAGCGGAACATAGACAGTAG	846	0.3818	MKSSMKKMSGVWPRRGTIQPKKQGYLRTLLSCGFSIRRGHTYKHSKNNVDDIYKREYICHRAGISKQQKVVELERQRRRKSSRCKCSAKLIITKRTIGFEERWVITYFSNSHNHTLLDNKEVHFLPAYRDIPINDQGRILLLSKVGCSISIIMRVLELEKGIEAGLLPFLEKDIRNFLQSHSNAGKDNDASETNVLRTGQTFCFLPLPIRTGLSVKVNGFFEVSSNVCGIWYGDDIDKSGKVRSNWNTLFLEDVVAHVFMHMLLGVKRRQQCWDWIAEHRQ	281

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lal12g1568	281	PANTHER	-	188	271	-	-
	Lal12g1568	281	Pfam	FAR1 DNA-binding domain	31	117	IPR004330	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lal12g1568	Lal-Chr12	18901980	18905343	Transposed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Lal12g1568		FAR1	5.6e-15	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lal12g1568	-		-	var:108339217	242.276