Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g1567 ATGGGTGATGCTATAGGAAACAAAATGACGTTGATGGTTGATGAGGTGTCAGGAGCCATTATTTTTAAAACGACGGTTATGATGATCAACAATATGTCAAAACCGCTCGTTCTTCACTGCAAAGACAAGAATCATGATAATGGTTTTGTTGGTTTGAATCCAGGTCAAAGTTATAGCTTCAACGTTGCTTGGAGAGGAGTATTTCACAGATTTGACATTTATAATGAACTAAGAGATCAATGTAAGAATTGTATCTGGGAAATATTTGAAAACCGTCTTTGTAAGATTTCTGCGGATGACCGAGCTGGTGAATGCTTTAATTGGTCTTCACTACAACTCAATAGTGATCATCAAGAAGAAAATGAAGAGAATATTAATATTAATATTGACACTCATCATGCCCTTATACAAGATGAGAATAAAGTCAAGGATGACAAAAATATCCGATTTATGAGTACCCGTCAAAATATTCACAATGGGTACCTGTAA 489 0.3517 MGDAIGNKMTLMVDEVSGAIIFKTTVMMINNMSKPLVLHCKDKNHDNGFVGLNPGQSYSFNVAWRGVFHRFDIYNELRDQCKNCIWEIFENRLCKISADDRAGECFNWSSLQLNSDHQEENEENININIDTHHALIQDENKVKDDKNIRFMSTRQNIHNGYL 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g1567 162 Pfam Plant self-incompatibility protein S1 26 108 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g1567 Lal-Chr12 18890728 18891309 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g1567 6 113 Carbohydrate Esterase AT3G16970 28.244 5.58e-08 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g1567 - K03424 lang:109347126 75.8701