Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g1565 ATGGGTGCTACTTTAGGGAACAAAATGACGTTGATGGTTGGTGAGGTGTCAGGAGGCTTTATTAATAAAACCACGGTTATAATGATCAATAACATGTCAAAACCGCTGAATCTTCATTGCAAAGACAAGAGTCATGATAATGGAGATATTGGTTTGAATCCAGGTCAAAGTTATAGCTTCAAGTTTATTGCTAATCCCTTTTTAAATGTAACTCTATGGCATTGCAGCTTTTCTTGGAGAGGAGCAGTTCGTAGATTTGACATTTATAATGAAAAAAGAGATCAATGTAAGACTTGCACTTGGGAAATGTTTGAAGCTAATCTTTGTAAGACTGCCTCGGGAATGCTTTCCATGGGATACATATCTTGA 369 0.3686 MGATLGNKMTLMVGEVSGGFINKTTVIMINNMSKPLNLHCKDKSHDNGDIGLNPGQSYSFKFIANPFLNVTLWHCSFSWRGAVRRFDIYNEKRDQCKTCTWEMFEANLCKTASGMLSMGYIS 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g1565 122 Pfam Plant self-incompatibility protein S1 26 110 IPR010264 -
Lal12g1565 122 PANTHER S-PROTEIN HOMOLOG 18-RELATED 12 111 - -
Lal12g1565 122 PANTHER - 12 111 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g1565 Lal-Chr12 18858480 18858886 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g1565 6 110 Carbohydrate Esterase AT3G16970 32.743 3.36e-13 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g1565 - - lang:109347126 86.6557