Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g1564 ATGTATCTAAAAGATTTGAATGTGATTGGGGCACTTGATATGATCGTTCATCATTTCATAACAAACAAACTTCCAAATTTACAATTGGGCTTTCATTGCAAGGACAAGCATCGTGATAATGGGTTTCACACTCTAGCTCCTGGTGAAACTTACCACTTCGGGTTTGCTATTGATATCTTATTTAATCGTACACAATGGTTTTGCCTCTTTGGTTGGGATGGAGAAAGTCACTCCTTTGATATTTATCTTGGAATTAGAGATGGATGCAAACATTGCGAATGGATAATAAAGAAGAAAGGGCCATGTAAGTATGATGGGCAATCCAAGTATTTTACTTGCTTTACATGGAATGACCAAGAACAACATGAACTTCAAGGGAGAAAGAGGCTTCTCAATTCTAACACTACTACTCACCAAGAACCAGCTCTTTCTCTTCAACCACTTAATTCACAAAGAATGGAATAA 465 0.3699 MYLKDLNVIGALDMIVHHFITNKLPNLQLGFHCKDKHRDNGFHTLAPGETYHFGFAIDILFNRTQWFCLFGWDGESHSFDIYLGIRDGCKHCEWIIKKKGPCKYDGQSKYFTCFTWNDQEQHELQGRKRLLNSNTTTHQEPALSLQPLNSQRME 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g1564 154 PANTHER - 16 116 IPR010264 -
Lal12g1564 154 MobiDBLite consensus disorder prediction 135 154 - -
Lal12g1564 154 Pfam Plant self-incompatibility protein S1 20 116 IPR010264 -
Lal12g1564 154 PANTHER S-PROTEIN HOMOLOG 18-RELATED 16 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g1564 Lal-Chr12 18856680 18857223 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g1564 27 120 Carbohydrate Esterase AT3G16970 43.564 7.11e-19 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g1564 - K17324 lang:109347126 219.935