Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g1559 ATGCAAATGATGGATGATGTTGAGTCAGGTATTCTTCCAAGAGCAAATATTGGAATAACAAACAAACTTCAGAATTTGGATTTGGTCTTTCACTGTAAGGACAAAGTTCGTGATGATGGATTTCGTGCTTTGTCTCCTAATCAAAGGTACAAGTTTGGGTTTACGCTTGATATCCTTTTAAATCATACGTTATGGTATTGCCGCTTTGGTTGGCTTGATGAAATTCACTACTTTGACATTTATAGTCAACAGAGAGATAGATGCAAAACTTGCGAATGGTTTATTCACCCAAATGGGCCATGTAGGTTTGTTACAGAAACGGAGACTGATATATGCTACACATGGAATGACAAAGGACCACCTCTTACTCTTAAACCACTTCATTCACTTGGAAGGAATTAA 402 0.3731 MQMMDDVESGILPRANIGITNKLQNLDLVFHCKDKVRDDGFRALSPNQRYKFGFTLDILLNHTLWYCRFGWLDEIHYFDIYSQQRDRCKTCEWFIHPNGPCRFVTETETDICYTWNDKGPPLTLKPLHSLGRN 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g1559 133 Pfam Plant self-incompatibility protein S1 17 115 IPR010264 -
Lal12g1559 133 PANTHER S-PROTEIN HOMOLOG 18-RELATED 9 115 - -
Lal12g1559 133 PANTHER - 9 115 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g1559 Lal-Chr12 18824126 18824527 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g1559 13 118 Carbohydrate Esterase AT3G16970 38.596 2.48e-19 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g1559 - - lang:109347126 154.836