Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g1555 ATGGCCATCGTTGTGTTTGCATCAATAATTGTAGCAATCTTCTTCTTCTTCTTCCTATATTTCTTTCATAGGAAACAATGTTGCAAAAATCCACTCTTTATAGATTGGCCTATCCTTGGCATGTTACCTAAAATTCTTTTCAATATATTACAGATTCATGACTTTATTACTGAGATTTTGATACAAAATAGTGGCACTGGTGAGTTCTTAGGACCATGGTTCACCAAAATGAACTACTTGGTCACTAGTGACCCAAATAATGTTCACCACATCATGAGCAAGTGTTTTGACAATTATGTTAAAGGACCCGTGTTTCGTGAGATTTTTCAACCTTTTGGAGATGGTATTTTCACTTCTGATTCTGACACATGGAAATACAATAGGTCTTTGTTCCATTCTTTGTTCAGACAGAAAAGATTTGAGATGTTTCTTGAGAAAACCATTCAGAAGAAAGTGAAAAATAGCTTACTTCCAATACTGGATCATGCACAACAACAAGGAACAGTGATTGACCTACAAGATGTTTTCAACCGATTCACATTCGATAACATATGTTCCTTAGTTCTAGGATATGATCCTAGTTGTCTTTCCATTGAATTCCCAGAAGTTGCATATGAGAAGGCCTTCAATGAAGCAGAAGAGTCCATATTCTACAGACACACAGTGCCAAAAAGTGTTTGGAAATTGCAGGAGTTGCTTCAAATTGGGCCAGAAAAAACCATGACAAAATCATGCAAAGTATTTGACCAGTTCATATATGCATGCATAAAGTCTAAGAGAGAAGAGATAAGAAAAAAGAGAGAGAATGAAATAGAAGAAAGTGATGATGATCATGTTGACTTTCTAACAACTTTGATTAGTGATGAGAAAGGAGGAGAAGGAGTACAACATGACAACATTTTTCTAAGAGATGCTGCATTTAATCTTTTTGTAGCTGGAAGAGATACCATAACTTCAGCTCTTACTTGGTTCTTCTGGCTTGTTGCTACAAACCCAATAGTGGAAACAAAGATTCTTGAAGAAATCAAAGAAAACTTTGGTGCCAAAGATGTTTTAGGTATAGAGGAAGTGAAAAAGTTAGTGTATTTGCATGGTGCTCTATGTGAAGCTATGAGGCTTTTTCCTCCTATACCTTTTGAGAGAAAACAAGCAATAAATGGTGATATACTTCCTAGTGGTCATCATGTTAAACCAAAAACAATGATAATATTTTCATTGTATTCAATGGGTAGATTTGAAAACATATGGGGAAAAGATTGCTTGGAATTCAAGCCAGAAAGATGGATTTCTGATAAAGGAAATCTTATTCATGTACCATCTTACAAATTCTTTAGTTTTAATGCAGGACCAAGAACTTGTTTAGGAAAAGACTTATCCTTCATTCAAATGAAGATGGTTGCAACTTCCATTTTGAGTAACTATAGTCTTCACTTGGAAGAAGGTCATCATGCTATACCTAGCCTTTCAATTGTACTTCTTATGAAGAATGGTTTCAAGGTTATGATAAAGAAGAGATAA 1518 0.3485 MAIVVFASIIVAIFFFFFLYFFHRKQCCKNPLFIDWPILGMLPKILFNILQIHDFITEILIQNSGTGEFLGPWFTKMNYLVTSDPNNVHHIMSKCFDNYVKGPVFREIFQPFGDGIFTSDSDTWKYNRSLFHSLFRQKRFEMFLEKTIQKKVKNSLLPILDHAQQQGTVIDLQDVFNRFTFDNICSLVLGYDPSCLSIEFPEVAYEKAFNEAEESIFYRHTVPKSVWKLQELLQIGPEKTMTKSCKVFDQFIYACIKSKREEIRKKRENEIEESDDDHVDFLTTLISDEKGGEGVQHDNIFLRDAAFNLFVAGRDTITSALTWFFWLVATNPIVETKILEEIKENFGAKDVLGIEEVKKLVYLHGALCEAMRLFPPIPFERKQAINGDILPSGHHVKPKTMIIFSLYSMGRFENIWGKDCLEFKPERWISDKGNLIHVPSYKFFSFNAGPRTCLGKDLSFIQMKMVATSILSNYSLHLEEGHHAIPSLSIVLLMKNGFKVMIKKR 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g1555 505 Pfam Cytochrome P450 45 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal12g1555 505 PANTHER CYTOCHROME P450 9 503 - -
Lal12g1555 505 PANTHER CYTOCHROME P450 FAMILY PROTEIN 9 503 - -
Lal12g1555 505 Coils Coil 253 273 - -
Lal12g1555 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 446 455 IPR017972 GO:0005506|GO:0016705
Lal12g1555 505 PRINTS P450 superfamily signature 312 329 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal12g1555 505 PRINTS P450 superfamily signature 365 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal12g1555 505 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal12g1555 505 PRINTS P450 superfamily signature 453 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal12g1555 505 Gene3D Cytochrome P450 21 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal12g1555 505 PRINTS E-class P450 group I signature 301 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal12g1555 505 PRINTS E-class P450 group I signature 321 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal12g1555 505 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal12g1555 505 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal12g1555 505 SUPERFAMILY Cytochrome P450 35 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g1555 Lal-Chr12 18788977 18790494 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g1555 1 505 Cytochrome P450 AT2G23180 45.508 1.04e-164 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g1555 - - gmx:100779590 714.146