Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g1549 ATGCATAAAAATCAAAACTTTACACTTAATATTATATTTTTCAGCTTCATAACATTCTGGGTCTTCTTCGTTTCTTCCCAGGACGAAGACAACGTGAGATGTCTCAAAGGGATAAAAAACACACTCCATGATCCTCAAAATCGCCTCTCCACGTGGCAGTTCGAGAACAATACCGTTGGTTTCATATGTGACTTTGTTGGAGTTTCATGTTGGAACCAGAGAGAGAATAGGGTTCTTGGATTGGAGCTCCGAGATTTTAAGTTATCGGGTCAGATCCCAGATTCTCTTAAATACTGTGGTAAGAGTCTTCAAAAATTGGATCTTGGGTCTAACATGTTGAGTTCTGAGATTCCTTCTGAGATTTGTAGTTGGATGCAGTTTTTGGTGTATTTGGATTTGTCAGATAATCAGCTTAGTGGGAATATTCCACCTACAATTGAGAACTGTTTTTATTTGAATGAGTTGATGCTTCAAAACAATAATCTTAGTGGTTCTATTCCTTATGAGTTTGGTGGTTTGAGTAGGCTTAAGAAGTTTTCTGTTGCTAATAATCACCTTAGTGGGACTATTCCTGCTATTTTTAGTGGCTATGATAAGGAAGATTTTGATGGGAATGATGGGTTGTGTGGGGGTCCTCTTGGATCTAAGTGTGGTGGGTTGAGTAAAAAGAGTCTTGCTATTATTATCGCTGCTGGTGTGTTCGGCGCCGCGGCGAGTTTGTTATTGGCTTTTGGGGTTTGGTGGTGGTATCATTTGAGTTTGAGTGGGAGGAGCAAGAGAGGGTATTGGGTTGGTGGCACGAGTGGTGATGAAAATTGGGCTGCGAGATTGATGGGTTTTAAACTTGTTCAGGTTACTCTTTTTCAGAGACCTATTGTGAAGGTTAAATTAGGGGACTTGTTGGCTGCTACTAATAATTTTAGTGCCAAGAATGTCATTATTTCGACGAGGACGGGGACTACTTATAAGGCGGATCTTCTGGATGGATCGATGCTCGCGGTGAAGAGGTTGAATACTTGTAAGAGTGGGAAGAAGCAGTTTCTGATGGAGGTGAATCGGCTAGGACAGGTGAGGCATCCGAATTTGGCACCACTTTTGGGATTCTGTGTTGTGGAGGAGGAGAAGCTTTTGGTTTATAAGCATATGCCGAATGGGACATTGTATTCATTGTTGCATGAAAGTGACAGCAGTGGTTTGGATTGGTTGATGAGGTTTAGGATAGGGCTAGGCGCGGCTAGGGGTCTCGCCTGGCTGCACCATGGGTGTCAACCTCCGATTATACAGCAGAACATTTGCTCCAATGTGATTCTCGTCGATGAGGATTTCGATGCTAGGTTAATGGACTTTGGACTAGCAAGGCTTATGATGTCTAACTCTAATGGTAGTTTCGTGAATGGGGACTTGGGGGAACTTGGGTATATAGCTCCGGAATATCCGAGCACCCTTGTTGCTTCGTTGAAAGGAGATGTCTATGGATTTGGCGTCTTGCTTTTAGAGTTGGCCACTGGGTGCAAACCTCTTGAAGTGAGCAACAATGAGGAAGAATTTAAAGGTAACTTAGTGGATTGGGTGAATATGCATTCTAGCCTGTGTCGAATAAAGGATTGCATTGACAGAGCCATATCTGGACGAGGACATGATGAGGAGATTCTGCAGTTTCTGAAAGTTGCTTTGAAATGTGTGGTTTCTAGCCCGAAGGATAGATGGTCTATGTATCAGGTGTATCATTCGTTAAAGGGTATATCCAAATTCCACAGTTTCTCCGAACATGACGATGAATTTCCGTTGATCTTTGGTAAGCCAGAAAACAAGCTGGCATAG 1821 0.4267 MHKNQNFTLNIIFFSFITFWVFFVSSQDEDNVRCLKGIKNTLHDPQNRLSTWQFENNTVGFICDFVGVSCWNQRENRVLGLELRDFKLSGQIPDSLKYCGKSLQKLDLGSNMLSSEIPSEICSWMQFLVYLDLSDNQLSGNIPPTIENCFYLNELMLQNNNLSGSIPYEFGGLSRLKKFSVANNHLSGTIPAIFSGYDKEDFDGNDGLCGGPLGSKCGGLSKKSLAIIIAAGVFGAAASLLLAFGVWWWYHLSLSGRSKRGYWVGGTSGDENWAARLMGFKLVQVTLFQRPIVKVKLGDLLAATNNFSAKNVIISTRTGTTYKADLLDGSMLAVKRLNTCKSGKKQFLMEVNRLGQVRHPNLAPLLGFCVVEEEKLLVYKHMPNGTLYSLLHESDSSGLDWLMRFRIGLGAARGLAWLHHGCQPPIIQQNICSNVILVDEDFDARLMDFGLARLMMSNSNGSFVNGDLGELGYIAPEYPSTLVASLKGDVYGFGVLLLELATGCKPLEVSNNEEEFKGNLVDWVNMHSSLCRIKDCIDRAISGRGHDEEILQFLKVALKCVVSSPKDRWSMYQVYHSLKGISKFHSFSEHDDEFPLIFGKPENKLA 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g1549 606 Gene3D Transferase(Phosphotransferase) domain 1 382 599 - -
Lal12g1549 606 SUPERFAMILY L domain-like 27 199 - -
Lal12g1549 606 Pfam Leucine Rich Repeat 128 149 IPR001611 GO:0005515
Lal12g1549 606 Pfam Leucine rich repeat N-terminal domain 30 71 IPR013210 -
Lal12g1549 606 ProSiteProfiles Protein kinase domain profile. 307 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal12g1549 606 Pfam Protein tyrosine and serine/threonine kinase 329 514 IPR001245 GO:0004672|GO:0006468
Lal12g1549 606 PANTHER - 11 599 - -
Lal12g1549 606 CDD STKc_IRAK 315 581 - -
Lal12g1549 606 SUPERFAMILY Protein kinase-like (PK-like) 286 578 IPR011009 -
Lal12g1549 606 PANTHER OS07G0107800 PROTEIN-RELATED 11 599 - -
Lal12g1549 606 Gene3D Ribonuclease Inhibitor 29 219 IPR032675 -
Lal12g1549 606 Gene3D Phosphorylase Kinase; domain 1 268 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g1549 Lal-Chr12 18740416 18742236 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g1549 16 604 Receptor kinase-like Gene Family AT3G28450 62.647 0.0 749
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Lal12g1549 PK_Tyr_Ser-Thr 8.8e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g1549 - - lang:109347314 1124.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g1549 12 18740416 18742236 Lal12g1549 12 18740416 18742236 ECH