Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g1501 ATGGATGAAGGGAGCAAAAAGAGGATAAGTTATAGCAAACTATATTCCTTTTCTTGTTTCAAATCTGTAAATGGAGATAGTCATTCACAAATTGGACAGAGAGGGTTCTCAAGGGTTGTGTATTGCAATGATCCTCATAATCCAGAATTGATTCAGTTGAGTTATAGAAGAAACTATGTTTCAACAACAAAGTATACATTCTTTAATTTTATCCCAAAGTCATTATTTGAGCAATTTAGGAGGGTTGCAAATATCTACTTTCTTATTGTGGCATGTGTTTCGTTTAGTGCATTAGCACCTTATACGCCCGTAAGTATTGTTGCGCCTTTGTTGTTTGTGATTGGAGCTACAATGGTCAAGGAAGCTGTAGAAGATTGGAAGAGGAGAAAGCAGGATATAAAGGCAAATAACCGAACGGTTCAAGTATATACTAGGAGTCATACATTTGTGGAGACTAGATGGAAGAAACTCGGTGTTGGTGATATCGTTAAAGTGTATAAGGACGAATACTTTCCTGCTGATCTACTTCTGCTTTCATCAAAATATGACGACGGGGTTTGCTATGTCGAGACAATGAATCTTGATGGAGAAACTAATCTAAAACTAAAGAATGCCTTGGAGGAGACGAATCATCTTCGTGATGAAAAATCTCTCCAAAAATTTAGGGCTATGGTCAAATGTGAAGATCCAAATGAAAATCTTTACTTATTTATTGGAAATTTATACTACGAGGGTAAAGAGTATCCTCTTTCCTTGCAGCAAATCCTTTTAAGAGGTTCTAAGTTGAAAAACACTGAATATATCTACGGTGTTGTTATCTTTACTGGCCCTGATACAAAAGTGATGCAGAATTCCACAGACCCTCCATCTAAGAGAAGCAAAATTGAGAAAAAAATGGATAAGATAATCTACATCCTCTTCAGTTCCTTGATATTGATATCCTTTGTCAGTTCTCTCTTTTTTGGCGTCGAGACCAAAAGGGATATTAGTGATGGAAGGTACAGAAGATGGTATCTTCTTCCATCGGATTCGACTGTGTTTTATGATCCTAGGAACGCGACGTTTGCTGCTATTCTTCATTTTTTGACTGCTCTTATGTTGTATGGATATCTGATTCCAATATCACTTTATGTGTCCATAGAACTTGTAAAAGTTCTGCAAAGTACATTCATCAACCGTGATCAGGAAATGTATTATGAAGAAACCGATAAGCCGGCTCGTGCACGTACGTCTAATCTGAATGAGGAACTCGGACAGGTCGAGACGATATTGTCTGACAAAACTGGTACTTTGACATGTAACTCAATGGAATTTGTCAAATGTTCCATAGCTGGTGTTCCATATGGCCGTGGTATGACAGAAGTGGAGAAAGCACTTGCAAGGAGAAAGGGTAGTCATGAATCTGGAGTTGATGATGTTTCATCCGATGTGTCAGGCCAAAGTAGTGATGCAGTGGAATCTCAACAGCGGATTAAGGGATTTAATTTTCGAGATGAGCGCATAATGAATGGACAATGGGTTAATGAAACGCATTCAGGCATCATACAGAAGTTCTTTCAAGTTCTAGGTATTTGTAATACAGCCATTCCTGATGTAGATGAAGAGTCGGGAGAAGTTTTGTATGAAGCTGAGTCGCCGGATGAAGCAGCGTTTGTCATAGCTGCAAGGGAACTTGGATTTGAACTTTGTGCAAGGACACAAACAAGCATATCATTGCATGAACTGATCGACGAAAGTGGAAAAAAGGTTGACAGAGTGTACCAGCTTCTGCATGTCTTAGAATTCAGCAGTTCTCGGAAAAGAATGTCAGTGATAATAAGGAATGAGGAAAATCAATTATTGCTCCTCTGCAAGGGTGCAGACAGTGTTATGTTTGAGAGACTCTCGCAATATGGAAGACAGTTTGAGGCTGAAACCAAAGATCATATCAAAAGATATGCCGAGGCTGGTTTAAGAACTCTTGTAATCGCGTACTGTAAACTTGGTGAAGAAGAATACAAGCTGTGGGAAGAGGAGTTTTCAAAGGCCAAAGCTTCTGTATCTGCAAACCGAGTCGCATTGGTGGATGCAGCTGTTGATAAGATGGAAAGAGATTTGATACTTCTTGGTGCTACAGCGGTTGAGGATCGACTGCAAAGCGGGGTTCCCGAGTGTATTGATAAGCTTGCACAAGCAGGAATCAAGTTATGGATATTGACCGGGGACAAGATGGAAACTGCAGTAAACATAGGATATGCTTGTAGTTTACTTAGGAAGGATATGAAGCAGATAGTGATCTCTCTTGATTCACCCGACATCTTATCCTTGGAAAAACACGGAGATAAGGAGATTCTAGTAAAGGCCTCTCTTGGAAGCATTAAGAAGCAAATTTTCGAGGGAATTTCAGAAATCAAGTCTGCGAAAGAGAGTTTTAATACAGAAAAGGGAAGTTCTTCATTTGCCTTGATAATTGATGGGAAGTCCTTGGATTTTTCTCTTAACAAGAATTTGGAGAGTTCATTCTTTGAGCTGGCAACTAATTGTGCTTCTGTCATATGCTGCCGATCTTCGCCCAAACAGAAAGCTCGTGTGAGTATTAAGAACGTGCAATTTGATTTTCTACGTCATATAAATAATAGAAGTTTCATCTATAGTTGGTTCTGGGATGTCAAAACATTAATTGTTGGACCAGATTACGATCGGGGACCCTCCAACCACCGGGGAGTTCCATTGTTACCGGGGTATGGAAAGAGTGGAGAGTCACAAGTTACAAGATTGGTGAAATCGGGAACAGGAAAGGCAACATTATCTATCGGTGATGGGGCGAACGATGTTGGCATGCTTCAAGAGGCTGATATTGGTGTTGGCATTAGTGGTGCTGAAGGGATGCAGGCTGTAATGGCAAGTGATTTTGCAATAGCTCAATTCCGTTTTTTGGAGCGTTTGTTATTGGTTCATGGTCACTGGTGCTATAGGCGAATATCGATGATGATATGCTATTTCTTCTATAAAAACATTGCGTTTGGATTCACGCTATTTTGGTTTGAGGCCTATGCTTCTTTCTCTGGTCAACCTGCGTACAACGATTGGTACATGTCATTTTACAATGTCTTCTTCACTTCACTTCCGGTAATCGCTCTTGGTGTTTTCGATCAGGATGTTTCGGCCCATCTTTGCCTAAAGGCACTTAAACATGTGGCTGGAATAGCTTATGACCTTTCTATATGCTTTCTTTACCTTATTTAA 3225 0.3988 MDEGSKKRISYSKLYSFSCFKSVNGDSHSQIGQRGFSRVVYCNDPHNPELIQLSYRRNYVSTTKYTFFNFIPKSLFEQFRRVANIYFLIVACVSFSALAPYTPVSIVAPLLFVIGATMVKEAVEDWKRRKQDIKANNRTVQVYTRSHTFVETRWKKLGVGDIVKVYKDEYFPADLLLLSSKYDDGVCYVETMNLDGETNLKLKNALEETNHLRDEKSLQKFRAMVKCEDPNENLYLFIGNLYYEGKEYPLSLQQILLRGSKLKNTEYIYGVVIFTGPDTKVMQNSTDPPSKRSKIEKKMDKIIYILFSSLILISFVSSLFFGVETKRDISDGRYRRWYLLPSDSTVFYDPRNATFAAILHFLTALMLYGYLIPISLYVSIELVKVLQSTFINRDQEMYYEETDKPARARTSNLNEELGQVETILSDKTGTLTCNSMEFVKCSIAGVPYGRGMTEVEKALARRKGSHESGVDDVSSDVSGQSSDAVESQQRIKGFNFRDERIMNGQWVNETHSGIIQKFFQVLGICNTAIPDVDEESGEVLYEAESPDEAAFVIAARELGFELCARTQTSISLHELIDESGKKVDRVYQLLHVLEFSSSRKRMSVIIRNEENQLLLLCKGADSVMFERLSQYGRQFEAETKDHIKRYAEAGLRTLVIAYCKLGEEEYKLWEEEFSKAKASVSANRVALVDAAVDKMERDLILLGATAVEDRLQSGVPECIDKLAQAGIKLWILTGDKMETAVNIGYACSLLRKDMKQIVISLDSPDILSLEKHGDKEILVKASLGSIKKQIFEGISEIKSAKESFNTEKGSSSFALIIDGKSLDFSLNKNLESSFFELATNCASVICCRSSPKQKARVSIKNVQFDFLRHINNRSFIYSWFWDVKTLIVGPDYDRGPSNHRGVPLLPGYGKSGESQVTRLVKSGTGKATLSIGDGANDVGMLQEADIGVGISGAEGMQAVMASDFAIAQFRFLERLLLVHGHWCYRRISMMICYFFYKNIAFGFTLFWFEAYASFSGQPAYNDWYMSFYNVFFTSLPVIALGVFDQDVSAHLCLKALKHVAGIAYDLSICFLYLI 1074
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g1501 1074 Pfam Phospholipid-translocating P-type ATPase C-terminal 959 1054 IPR032630 -
Lal12g1501 1074 Pfam E1-E2 ATPase 136 329 - -
Lal12g1501 1074 Gene3D - 112 287 - -
Lal12g1501 1074 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 431 661 IPR023299 GO:0000166
Lal12g1501 1074 PRINTS P-type cation-transporting ATPase superfamily signature 424 438 - -
Lal12g1501 1074 PRINTS P-type cation-transporting ATPase superfamily signature 931 950 - -
Lal12g1501 1074 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 4 857 - -
Lal12g1501 1074 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 915 1054 - -
Lal12g1501 1074 SUPERFAMILY Calcium ATPase, transmembrane domain M 52 1053 IPR023298 -
Lal12g1501 1074 ProSitePatterns E1-E2 ATPases phosphorylation site. 426 432 IPR018303 -
Lal12g1501 1074 SUPERFAMILY HAD-like 412 976 IPR036412 -
Lal12g1501 1074 Gene3D - 702 971 IPR023214 -
Lal12g1501 1074 Pfam Cation transport ATPase (P-type) 525 630 - -
Lal12g1501 1074 Pfam Phospholipid-translocating ATPase N-terminal 40 105 IPR032631 -
Lal12g1501 1074 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 55 858 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Lal12g1501 1074 MobiDBLite consensus disorder prediction 462 484 - -
Lal12g1501 1074 Gene3D - 543 701 IPR023299 GO:0000166
Lal12g1501 1074 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 9-RELATED 915 1054 - -
Lal12g1501 1074 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 9-RELATED 4 857 - -
Lal12g1501 1074 SUPERFAMILY Calcium ATPase, transduction domain A 142 284 IPR008250 -
Lal12g1501 1074 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 924 1013 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal12g1501 1074 CDD P-type_ATPase_APLT_Dnf-like 57 1054 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g1501 Lal-Chr12 18230142 18238752 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g1501 9 1054 Primary Pumps ATPases AT1G68710 61.296 0.0 1325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g1501 K01530 - cit:102615375 1481.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g1501 12 18230142 18238752 Lal12g1501 12 18230142 18238752 ECH