Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g1494 ATGAAGTGGTCTAAAATTGCAAAGCATCTACCAGGAAGAACGGACAATGAAATTAAGAACTTTTGGAGAACTAGGATTCAAAAGCACATTAAACAAGCTGAGAATTTCCAACAACAAAGTACTTCTAATCAGACAAATGATAATCATCATCATCAGCATCATCATGCAAGCACTAGTCAAATGTCCACAAACATGGCTCAACATGAACCAATGGAAACAACTTATTCACCATCTTCATACCAAGGAACAACTTTGGATCCAATATTTCCAACTCATCAGTTTCCAACATTAATCCCTGATCAACCTAGTTGTTGTCCTACCAATGACAACACTGATTGGAGCATGGAAGATATTTGGTCAATGTGA 366 0.3689 MKWSKIAKHLPGRTDNEIKNFWRTRIQKHIKQAENFQQQSTSNQTNDNHHHQHHHASTSQMSTNMAQHEPMETTYSPSSYQGTTLDPIFPTHQFPTLIPDQPSCCPTNDNTDWSMEDIWSM 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g1494 121 Gene3D - 1 69 - -
Lal12g1494 121 MobiDBLite consensus disorder prediction 31 87 - -
Lal12g1494 121 CDD SANT 2 24 IPR001005 -
Lal12g1494 121 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 2 121 IPR044676 GO:0003700|GO:0006355|GO:0043565
Lal12g1494 121 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 30 IPR017930 -
Lal12g1494 121 SUPERFAMILY Homeodomain-like 2 32 IPR009057 -
Lal12g1494 121 Pfam Myb-like DNA-binding domain 2 24 IPR001005 -
Lal12g1494 121 MobiDBLite consensus disorder prediction 57 87 - -
Lal12g1494 121 MobiDBLite consensus disorder prediction 31 46 - -
Lal12g1494 121 ProSiteProfiles Myb-like domain profile. 1 26 IPR001005 -
Lal12g1494 121 PANTHER TRANSCRIPTION FACTOR MYB21-RELATED 2 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g1494 Lal-Chr12 18152363 18152805 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g1494 2 120 MYB Transcription Factor Family AT3G27810 44.186 7.13e-23 86.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lal12g1494 Myb_DNA-binding 2.9e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g1494 K09422 - gmx:778046 135.191