Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g1485 ATGAATACGACGCCGTTCATGGACAAACAGATAATGGATCTAACTTACGGTTCTTCTTCACACAATCATCAAACCAAAGATTTCATCGATCTTATGAAAAACCAAAACGACGACGTTCAACAACATCATCATCATCATGAAATTCAACAAACCAAAGATAATGAGATCAACAAAGACGACATCGTTCCAAGCTACGATTTTCAACCTATTCGTTCTCTCTCTTCTTCAAATTACACTTCTGCCCCTAATCTCGATCCCGCTTTTTGGAATAATTCTGATCATTCCAACTCTAACCCTATTCCTAATTCTTCCAAACCCATTATCAAAAGTTACAGTTCACTGGATTCTATTGAACCTGCAAAGGTCAGTGCAGAAAAGGACCAAAATGCTTTTGAGTCTACAATCTTGTCCGAAATTGATCGGACCATGAGGAAACATACAGACAATTTGCTGCATGTTCTGGAAGGTGTTAGTGCACGCTTAACACAACTAGAAAGCAGAACTCACCGTTTTGAGAATACTGTCGATGATTTGAAGGTATCTGTTGGAAATAATCATGGTAGCACTGATGGAAAATTGAGGCAGTTAGAGAATATTCTTCGAGAGGGTTCATTTTGTTGGCTTGTTTTTTGTGTTCTTCCCATAGTCTCCTTAGGGTCTGTTTGCGAGTTGGATTTTGGAGGGGGGAAAAGGGAAAGAGGAGGTTTCAGAGCCATGAAATACAATTGTGAGATGACTCCAAAGCCTTTATTCCTCTCCAAAATCCAACTCGCAAACAGACGTTCAGAGGTGCAAACAGGGGTGCAGACTATCAAGGACAAGCAAGATATAGTGGAAGCTCAGTTGCAACTAGCAAAGCTTCAAGTGTCCACCGAGATGGACAAACCATCCGACACTCAAACTAATGCAATTCCAGATCCTGTGCAACAAGCTGCATCTGCACCCCTGCAATCTCAACAACACTTTCCTTCCATTGGTAATCGTCCACAATCGATACTGGCGGTTCCTCCCCCTAATGCAGCTCCTCAACTTCCCTCTCAACAGGGCTTGCCGCCATCAGTTTTCCCTCAGAACCAAATCCCAGCTGTTCCTCAGAGAGATCCATACTTCCCACAACAAGTACCACCTGTTCCATCTCAGGAAACCGTGAATCAGCAATACCAACTGCCCTTATCTCAGCAGCCACATCCTCAGCCCGGGGCACCTCCTCCAAATCAGCAATATCAACAGACCCCTCATTCTCAGTACCCTCCTCAGCCGACACTTCATCTACCTCAACAGCAGCCGTCACATTCACCGATAAATCCACCTCAGCTACAATCTTCACTAGGTGGTCACCTTGTGGAGGAACCAACACCTTATGTTACTTCTCAGAGTTATCCTCCCAATCTCCGGCAGCCACCGTCTCAGCCGCCTAGCGGACCTCCTCCTTCTCAACAGTTCTATGGTGCACCACCACCACACCATGTGGCATATGAACCACCCTCGAGTAGACCTGGTTCAGGTTTTTCTTCTGGATATGGTACTGCATCCGGGCCTGCTGATCAATATCGTTATGGTGGATCATCTCAATATGGTGGCAGTTCGGCTCCGAAACCATCACAACTACCTACTGCTTCAAGTGGGGGAACCGGTTACCCGCAACTCCCAACTGCTCGGGTGCTCCCACAGGCATTGCCTACTGCATCTTCGGCAAGCAGTGCTCCAGGTTCTCCTGGAGCTGGAAACCGAGTTTCTATCGATGATGTAGTTGACAAAGTTGCTAGTATGGGATTCCCTAGAGACTATGTGAGGGCAACAGTTCGGAAGCTTACGGATAATGGTCAGTCGGTTGACCTAAATGCAGTGCTGGATAAGCTTATGACTGAAGGTGAAAATCAGCCTCCAAGAGGTTGGTTTGGTGGGAGGTAG 1911 0.461 MNTTPFMDKQIMDLTYGSSSHNHQTKDFIDLMKNQNDDVQQHHHHHEIQQTKDNEINKDDIVPSYDFQPIRSLSSSNYTSAPNLDPAFWNNSDHSNSNPIPNSSKPIIKSYSSLDSIEPAKVSAEKDQNAFESTILSEIDRTMRKHTDNLLHVLEGVSARLTQLESRTHRFENTVDDLKVSVGNNHGSTDGKLRQLENILREGSFCWLVFCVLPIVSLGSVCELDFGGGKRERGGFRAMKYNCEMTPKPLFLSKIQLANRRSEVQTGVQTIKDKQDIVEAQLQLAKLQVSTEMDKPSDTQTNAIPDPVQQAASAPLQSQQHFPSIGNRPQSILAVPPPNAAPQLPSQQGLPPSVFPQNQIPAVPQRDPYFPQQVPPVPSQETVNQQYQLPLSQQPHPQPGAPPPNQQYQQTPHSQYPPQPTLHLPQQQPSHSPINPPQLQSSLGGHLVEEPTPYVTSQSYPPNLRQPPSQPPSGPPPSQQFYGAPPPHHVAYEPPSSRPGSGFSSGYGTASGPADQYRYGGSSQYGGSSAPKPSQLPTASSGGTGYPQLPTARVLPQALPTASSASSAPGSPGAGNRVSIDDVVDKVASMGFPRDYVRATVRKLTDNGQSVDLNAVLDKLMTEGENQPPRGWFGGR 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g1485 636 MobiDBLite consensus disorder prediction 37 60 - -
Lal12g1485 636 Pfam UBA-like domain (DUF1421) 580 623 IPR010820 -
Lal12g1485 636 MobiDBLite consensus disorder prediction 498 547 - -
Lal12g1485 636 MobiDBLite consensus disorder prediction 557 573 - -
Lal12g1485 636 MobiDBLite consensus disorder prediction 376 394 - -
Lal12g1485 636 MobiDBLite consensus disorder prediction 310 578 - -
Lal12g1485 636 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 256 634 - -
Lal12g1485 636 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 1 202 - -
Lal12g1485 636 MobiDBLite consensus disorder prediction 310 327 - -
Lal12g1485 636 MobiDBLite consensus disorder prediction 425 442 - -
Lal12g1485 636 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 256 634 - -
Lal12g1485 636 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 1 202 - -
Lal12g1485 636 MobiDBLite consensus disorder prediction 464 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g1485 Lal-Chr12 18074218 18078216 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g1485 474 636 Trihelix Transcription Factor Family AT5G14540 51.977 8.34e-37 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g1485 - - lja:Lj2g3v0932920.1 480.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g1485 12 18074218 18078216 Lal12g1485 12 18074218 18078216 ECH