Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g1481 ATGGCCTCTTCATCTAGCTATTCAAATTCTCCTTGTGCTGCATGCAAGTTTCTAAGAAGAAAATGCATGCCAGATTGTCTTTTTGCCCCATATTTCCCACCAGAAGAGCCTCAAAAATTTGCCAATGTTCACAAGATATTTGGTGCAAGTAATGTGAGTAAACTTCTCAATGAAGTTCTACCTCATCAAAGAGAGGATGCAGTAAACTCTCTAGCTTATGAAGCTGAAGCAAGGATTAAAGATCCAGTGTATGGATGTGTTGGTGCTATTTCTGTGCTCCAAAGACAAGTTATGAGGCTTCAAAAGGAACTAGATGCTACAAATTCTGATTTGATAAGATATACTTGTAATGAAATGCCAACAACAACAACTACTACTACTAATCAAGGTGGGAGAAGGGTTAGTGAAGGAGGAGGTTCCTCTATTGGTCAATCTTCTGGTTTTTATTATCATTCTACTTGGAACAATGATCATCTATGA 480 0.3792 MASSSSYSNSPCAACKFLRRKCMPDCLFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVLPHQREDAVNSLAYEAEARIKDPVYGCVGAISVLQRQVMRLQKELDATNSDLIRYTCNEMPTTTTTTTNQGGRRVSEGGGSSIGQSSGFYYHSTWNNDHL 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g1481 159 Coils Coil 90 110 - -
Lal12g1481 159 ProSiteProfiles LOB domain profile. 10 111 IPR004883 -
Lal12g1481 159 Pfam Lateral organ boundaries (LOB) domain 11 108 IPR004883 -
Lal12g1481 159 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 157 - -
Lal12g1481 159 PANTHER LOB DOMAIN-CONTAINING PROTEIN 25 4 157 - -
Lal12g1481 159 MobiDBLite consensus disorder prediction 120 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g1481 Lal-Chr12 18036465 18036944 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g1481 1 114 AS2 family AT5G63090 85.965 2.61e-71 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lal12g1481 LOB 2.4e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g1481 - - lang:109347269 279.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g1481 12 18036465 18036944 Lal12g1481 12 18036465 18036944 ECH