Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g1480 ATGGCGGGGTTAGAGGAATTGAGAAAAAAGCTTGCACCTTTGTTTGATGCTGACAAGGGTTTCTCTACAACTTCAACTTTTGACCCTTCTGATTCTTACACTCTATCAGATGGTGGAACTGTGAACTTGTTGAGCAGATCGTATGGAGTGTACAATATCAATGAGCTTGGGTTGCAAAAGTGCACATCGGACGAAAGCGAACACAGTGAGAAAACATATAATTGTGCTTCCAATGAGATGAGAATATTTGGGGCAATAGGTAGTGGTGCTAGTAGTGTTGTGCAGAGAGCTATACATATACCAACTCATAGGATTCTAGCATTGAAGAAGATCAATATCTTTGAGAAGGAGAAAAGGCAGCAGCTACTTACCGAGATAAGGACGTTGTGTGAAGCACCATGCTATGAGGGTCTTGTAGAATTTCAGGGTGCATTTTACACTCCAGATTCTGGACAGATAAGCATAGCATTGGAGTACATGGATGGAGGATCGCTTGTAGATATACTGAGAAAGCATAGAAGAATACCTGAACCTATTCTTTCATCCATGTTTCAAAAGCTTCTTCATGGTCTAAGCTATCTGCACGGAGTCAGACATTTAGTTCACAGAGACATAAAGCCTGCTAATTTACTTGTAAATCTCAAAGGGGAACCCAAAATTACCGATTTTGGTATTAGTGCTGGCTTAGAGAATTCAGTGGCAATGGTTAGTATGGATCATAGAATAGCATGGACTACATTCCCAAGCTTCAAAGTTTATGTTCATTCATCTCCAAATGGTGTAACTTTGCAGTGCGCTACATTCGTTGGAACTGTTACCTACATGTCACCTGAGAGAATTCGAAATGAAAGCTATTCTTATCCAGCTGATATTTGGAGCCTTGGTCTTGCTCTCCTCGAGTGTGGGACAGGAGAATTTCCATATACAGCGAGCGAAGGTCCCGTCAATCTTATGTTGCAGATCCTGGAGGATCCATCACCGTCGCCATCAAAGCAAACATTTTCACCTGAATTCTGCTCCTTTGTTGATGCATGTTTACAAAAGGATCCAGATATTAGGCCGACGGCAGAGCAGCTTCTTTTGCATCCTTTTATTACAAAGCACGAGACTGCCAAGGTAGATTTAGCAGGATTTGTTCGGAGCGTTTTCGACCCTACGCAAAGAATGAAGGACTTGGCAGATATGTTGACAATACATTATTATTTACTATTTGATGGACCTGTTGATTTGTGGCAACATACAAGGAGCTTATATAATGAAAGCTCAGTTTTCAGTTTCTCAGGGAAACAACACATTGGTCCTAACAATATCTTCACAGCACTATCAAGTATTAGAAGTACATTATTTGGTGATTGGCCTCCTGAAAAGTTGGTGCATGTGGTTGAGAAGGTTCAATGTCGCGCTCACGGCGAAGACGGAGTTGCAATCCGGGTATCAGGATCGTTCATAATTGGTAACCAGTTCCTCATATGTGGAGATGGCATTCAAGTAGAGGGTTTGCCAAATTTTAAGGATCTTGGTATTGATATTAGTAGCAAGAGAATGGGTACATTTCATGAACAATTTCTTGTGGAACCAACTACCCTTATTGGATGTTACACCATAGTTAAACAAGAATTGTATATTAACCAATAG 1635 0.4086 MAGLEELRKKLAPLFDADKGFSTTSTFDPSDSYTLSDGGTVNLLSRSYGVYNINELGLQKCTSDESEHSEKTYNCASNEMRIFGAIGSGASSVVQRAIHIPTHRILALKKINIFEKEKRQQLLTEIRTLCEAPCYEGLVEFQGAFYTPDSGQISIALEYMDGGSLVDILRKHRRIPEPILSSMFQKLLHGLSYLHGVRHLVHRDIKPANLLVNLKGEPKITDFGISAGLENSVAMVSMDHRIAWTTFPSFKVYVHSSPNGVTLQCATFVGTVTYMSPERIRNESYSYPADIWSLGLALLECGTGEFPYTASEGPVNLMLQILEDPSPSPSKQTFSPEFCSFVDACLQKDPDIRPTAEQLLLHPFITKHETAKVDLAGFVRSVFDPTQRMKDLADMLTIHYYLLFDGPVDLWQHTRSLYNESSVFSFSGKQHIGPNNIFTALSSIRSTLFGDWPPEKLVHVVEKVQCRAHGEDGVAIRVSGSFIIGNQFLICGDGIQVEGLPNFKDLGIDISSKRMGTFHEQFLVEPTTLIGCYTIVKQELYINQ 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g1480 544 SUPERFAMILY Protein kinase-like (PK-like) 81 422 IPR011009 -
Lal12g1480 544 Gene3D Transferase(Phosphotransferase) domain 1 157 380 - -
Lal12g1480 544 SMART serkin_6 80 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal12g1480 544 SUPERFAMILY NTF2-like 390 487 IPR032710 -
Lal12g1480 544 PANTHER DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED 264 543 - -
Lal12g1480 544 PANTHER DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED 2 237 - -
Lal12g1480 544 ProSiteProfiles Protein kinase domain profile. 80 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal12g1480 544 CDD PKc_MAPKK_plant_like 81 369 - -
Lal12g1480 544 ProSiteProfiles Nuclear transport factor 2 domain profile. 392 542 IPR018222 -
Lal12g1480 544 Gene3D - 384 542 - -
Lal12g1480 544 Pfam Protein kinase domain 84 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal12g1480 544 ProSitePatterns Serine/Threonine protein kinases active-site signature. 200 212 IPR008271 GO:0004672|GO:0006468
Lal12g1480 544 PANTHER - 2 237 - -
Lal12g1480 544 PANTHER - 264 543 - -
Lal12g1480 544 ProSitePatterns Protein kinases ATP-binding region signature. 86 109 IPR017441 GO:0005524
Lal12g1480 544 Gene3D Phosphorylase Kinase; domain 1 54 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g1480 Lal-Chr12 18022266 18028139 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g1480 35 544 MAP Kinase Kinase Gene Family AT5G40440 75.244 0.0 795
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Lal12g1480 Pkinase 2.3e-55 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g1480 K20607 - gmx:100784935 941.799
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g1480 12 18022266 18028139 Lal12g1480 12 18022266 18028139 ECH