Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g1475 ATGAAAGATGCTTATGCTTTCATTAAGGCTAGTAGCAACCATCTAAATTGGTGTAAGCTCATATGGTCCAGCTCTATTCCTCATTCTAAATCTTTCCTTACTTGGAGGCTTATGCTAAACAAGCTTCCAACTGATGAAAATCTCATGAGGAGATGTATACCCCTGACCTTTGTTTGTAACCTTTGCTTTGCCGGGGAAGAAATATCCGATCACATTTTCTTCCAATGTAAATTTGCGTCTTCGCTATGGCAGTGGTTCAATAGTCTGGCGGAGTCAATATTCGAAGTCTACGAAGCTAAAGTTCTAATGACAAACAAACTTTCAACTCCACTTACTCTTCATTGCAAAGACAAGACCCATGATGATCATATCAATACACTGCAACCAGGTGAAAGTCATCGTTTTAAGTTCGTCCCTAATCCATTTGGTACTGCATCTCTATGGTTTTGCAGCTTTAATTGGACAGGTGCATTTCACCGCTTTGACATTTTTGTTCAAAAAAGAGATGAGTGCCACGATTGCAATTGGGAAATATATACAACTGGACCATGTAAACTTGATCCACTAGTAAAATGCTATCCATGGTATAGTTGA 594 0.3889 MKDAYAFIKASSNHLNWCKLIWSSSIPHSKSFLTWRLMLNKLPTDENLMRRCIPLTFVCNLCFAGEEISDHIFFQCKFASSLWQWFNSLAESIFEVYEAKVLMTNKLSTPLTLHCKDKTHDDHINTLQPGESHRFKFVPNPFGTASLWFCSFNWTGAFHRFDIFVQKRDECHDCNWEIYTTGPCKLDPLVKCYPWYS 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g1475 197 Pfam zinc-binding in reverse transcriptase 1 83 IPR026960 -
Lal12g1475 197 PANTHER S-PROTEIN HOMOLOG 18-RELATED 93 195 - -
Lal12g1475 197 Pfam Plant self-incompatibility protein S1 101 195 IPR010264 -
Lal12g1475 197 PANTHER - 93 195 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g1475 Lal-Chr12 17963085 17965078 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g1475 92 197 Carbohydrate Esterase AT3G16970 35.593 4.89e-14 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g1475 - - lang:109341679 124.405