Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g1455 ATGGGGTTTGGAAATAATGCAATCCAAGCTGGGAGTTTAGATGTTGGAAAGTCAAAGGTAGATGGTAATGAAGAGAAGAAGAGAGGGTTTTGGTTTAAATTCATTTTCTGTGGAAACTGCATACCTTCAACATCAAAGGTTGATTCTTCCATAAATGGCACTAGTACCCAAAATGTCGGAAAAAAGTCGTCATTCGTAAAAAGCACAAATGTAACAGTTCCTCCTCCAGAGTCCTCATCAACATCTAGTAATGTCGAAAGTATCCCTTCTACTCCAAAATTCAGTGAGGAGTTGAAGGTCGCTTCTAGTTTGAGAAAATTCACATTCAATGGTCTTAGGGTGGCAACTAGGAATTTCAGACCAGAGAGTCTTCTCGGTGAAGGAGGGTTTGGTTGCGTCTTCAAGGGTTGGATTGAGGAGAACGGAACTGCGCCTATGAAACCAGGCACTGGGCTAACCGTCGCAGTCAAGACCCTCAACCACAACGGAAAGCAGGGTCACAAAGAATGGCTTGCTGAGTTAAACTATCTCGGTGACCTTCTCCATCCGAATCTAGTTAAACTGATTGGCTTCTGCATCGAAGATGACCAAAGATTACTAGTTTATGAGTTTATGCCCCGAGGAAGTTTGGATAACCACCTCTTTAGGAAAGGGCCCTTGCCTCTTCCATGGTCTATCAGAATGAAAATTGCACTTGGTGCCGCAAAAGGTCTTGCTTTTCTCCATGAAGAAGCTAAGAGGCCAATAATATATCGGGATTTCAAGACATCTAATATTCTGTTAGATGCGGAATACAATGCGAAGCTCTCTGATTTTGGACTTGCCAAAGACGCTCCCGAGGGGGAAAAGACACATGTATCAACAAGAGTTATGGGAACATATGGTTATGCTGCTCCGGAATATGTTATGACAGGACATTTGACATCAAAGAGTGATGTCTACAGTTTTGGAGTAGTGCTACTGGAAATGCTCACTGGTCGGAGATGTATTGATAAAAGAAGACCAACGGGGGAACACAATCTGGTGGAGTGGGCAAGACCTATGCTTGGAAACTGGAGGATGTTCCTCCGGATAATGGATCCACGCCTTGAAGGTCACTTCTCAGTTAAAGGGGCACAGAAAGCTTCTCAGCTAGCTTCTCAGTGCCTTAGCCGAGATCCGAAAGCTAGGCCTTTGATAAGTGAAGTTGTTAAAGCTTTAAAGCCTTTGCCAAACCTTAAGGACATGGCTAACTCATCTTATAACTTCCAGGACGCCCGAGTAGACCGAACCTTGTCCATGCCGAATTGCAAAAATGTTATTAAAACACAGTTAGTGTCTTTACCGAAAAAGGGTCAAGCTATGAGGACCTTGTCAAGTTCAAATGCACCACATGGTTCTCCATATCCTCATTATAACAAGTCTCCAAAATCTCATGTGTAA 1422 0.4332 MGFGNNAIQAGSLDVGKSKVDGNEEKKRGFWFKFIFCGNCIPSTSKVDSSINGTSTQNVGKKSSFVKSTNVTVPPPESSSTSSNVESIPSTPKFSEELKVASSLRKFTFNGLRVATRNFRPESLLGEGGFGCVFKGWIEENGTAPMKPGTGLTVAVKTLNHNGKQGHKEWLAELNYLGDLLHPNLVKLIGFCIEDDQRLLVYEFMPRGSLDNHLFRKGPLPLPWSIRMKIALGAAKGLAFLHEEAKRPIIYRDFKTSNILLDAEYNAKLSDFGLAKDAPEGEKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRCIDKRRPTGEHNLVEWARPMLGNWRMFLRIMDPRLEGHFSVKGAQKASQLASQCLSRDPKARPLISEVVKALKPLPNLKDMANSSYNFQDARVDRTLSMPNCKNVIKTQLVSLPKKGQAMRTLSSSNAPHGSPYPHYNKSPKSHV 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g1455 473 PANTHER RECEPTOR-LIKE KINASE PLANT 53 465 - -
Lal12g1455 473 Gene3D Transferase(Phosphotransferase) domain 1 205 424 - -
Lal12g1455 473 SUPERFAMILY Protein kinase-like (PK-like) 93 400 IPR011009 -
Lal12g1455 473 ProSitePatterns Serine/Threonine protein kinases active-site signature. 249 261 IPR008271 GO:0004672|GO:0006468
Lal12g1455 473 Gene3D Phosphorylase Kinase; domain 1 99 204 - -
Lal12g1455 473 PANTHER OS01G0588500 PROTEIN-RELATED 53 465 - -
Lal12g1455 473 ProSiteProfiles Protein kinase domain profile. 119 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal12g1455 473 MobiDBLite consensus disorder prediction 67 88 - -
Lal12g1455 473 CDD STKc_IRAK 125 403 - -
Lal12g1455 473 Pfam Protein kinase domain 122 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal12g1455 473 MobiDBLite consensus disorder prediction 446 461 - -
Lal12g1455 473 ProSitePatterns Protein kinases ATP-binding region signature. 125 157 IPR017441 GO:0005524
Lal12g1455 473 MobiDBLite consensus disorder prediction 444 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g1455 Lal-Chr12 17780876 17785312 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g1455 105 418 Glycoside Hydrolase AT3G07070 54.114 1.50e-112 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lal12g1455 Pkinase 1.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g1455 - - gmx:100499647 772.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g1455 12 17780876 17785312 Lal6g0869 6 5911941 5915466 PCT
Lal6g0869 6 5911941 5915466 Lal12g1455 12 17780876 17785312 PCT