Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g1434 ATGTGTTTCTCACAAACGCTGTTTTTTCATAACAACAACTTCAGGATGGAAGCAATGAGAAAAGTTTGTAGATACATGCATGAAGATCAAGTGCTTAAATTGCCACCAGGTTTTCGGTTTCATCCAACTGATCAAGAACTCATAATTTATTATCTCTCTGAGAAGGTTCTCAACAACAACTTCAGTTCTATAGCCATTGGAGAAGTTGATCTCAATAGCTGTGAGCCATGGGTATTGCCTAGTATGGCGAAAATGGGTGAAAAAGAATGGTATTTTTTCTGTGTGAGGGACAAGAAATACCCAAGTGGTGAAAGGACTAATAGGGCAACTAGTGCTGGATATTGGAAGGCCACAGGAAAAGACAAAGATATATATCAGGAAAAGGCACTGATTGGAATGAAGAAAACTCTTGTTTTCTACAAAGGAAGAGCTCCAAAAGGTGAAAAAACTAACTGGGTCATGCATGAATATAGATTGGATGGAGAAAATTCTATGAACAATTTATCTAAATCCTCTAAGGAAGATTGGGCTGTGTATAGAGTTTTTCAAAAGAGTTCCAATGGCAAAAGAATGAATATTCCATTGTTGTCAGAACTTCCTCCATTGAATGATTCTCCTCTTCCAAATAGAATTGAAGATATGAAGACAACAAATAGTGACATCATAGTTGATAGTTTTGAAACTCCTCCTATGTTTCCACCACCTTCTTATTCTCCATATCATTCTGAAATTTTCCCTTCTACATGGGATTTTACCAACACTACACAATTTGCAAATAATCAAGTTGGAAATAATAATGCACAATACTCACATGATGGTTATTTCATGAACCAAGACCATGGATCAAGTACTATGCACAACAACAACAACAACAACAATAATGACAAAAAAGCTAAGGAAAGTGACTTTGATGCTTCAAACATCTTTGGTTGGAAATAA 939 0.3578 MCFSQTLFFHNNNFRMEAMRKVCRYMHEDQVLKLPPGFRFHPTDQELIIYYLSEKVLNNNFSSIAIGEVDLNSCEPWVLPSMAKMGEKEWYFFCVRDKKYPSGERTNRATSAGYWKATGKDKDIYQEKALIGMKKTLVFYKGRAPKGEKTNWVMHEYRLDGENSMNNLSKSSKEDWAVYRVFQKSSNGKRMNIPLLSELPPLNDSPLPNRIEDMKTTNSDIIVDSFETPPMFPPPSYSPYHSEIFPSTWDFTNTTQFANNQVGNNNAQYSHDGYFMNQDHGSSTMHNNNNNNNNDKKAKESDFDASNIFGWK 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g1434 312 Pfam No apical meristem (NAM) protein 35 159 IPR003441 GO:0003677|GO:0006355
Lal12g1434 312 Gene3D NAC domain 43 189 IPR036093 GO:0003677|GO:0006355
Lal12g1434 312 ProSiteProfiles NAC domain profile. 34 184 IPR003441 GO:0003677|GO:0006355
Lal12g1434 312 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 26 294 - -
Lal12g1434 312 PANTHER NAC DOMAIN-CONTAINING PROTEIN 100 26 294 - -
Lal12g1434 312 MobiDBLite consensus disorder prediction 264 312 - -
Lal12g1434 312 SUPERFAMILY NAC domain 27 184 IPR036093 GO:0003677|GO:0006355
Lal12g1434 312 MobiDBLite consensus disorder prediction 264 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g1434 Lal-Chr12 17534195 17536658 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g1434 32 205 NAC Transcription Factor Family AT5G07680 66.120 4.68e-87 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lal12g1434 NAM 1.5e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g1434 - - lang:109347348 488.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g1434 12 17534195 17536658 Lal12g1434 12 17534195 17536658 ECH
Lal12g1434 12 17534195 17536658 Lal13g1806 13 17555190 17557603 ECH