Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g1431 ATGGCAGCTTCACCTTCTGTATTAACTGTCTCACACGACGGAACTGGACACTACAAAACAGTGCAGGAAGCTATCAACGCCGTGCCACTCGGCAACACTCGCCGTACCATCATTCGGGTGTCGCCGGGAACCTATAAGCAACCACTTTACGTGGCCAAGACCAAGAACTTCATTACCCTTTCTGGTATCTGTCCTGAGGAAACTGTTCTTACTTGGAACAACACAGCCACCAAAATCCAACACCACCAAGGTGATAAGGTGATAGGAACTGGGACGTTTGGTTGTGGCAGCGTTATTGTGGAAGGGAGTGACTTTATTGCTGAGAATATTACCTTTCAGAATTCTTCCCCTCAGGGCTCTGGGCAAGCAGTGGCACTTAGAGTGACAGCAGATAGATGTGCCTTCTACAATTGCAGGTTCCTTGGATGGCAAGACACACTTTACTTACATTACGGTAAACAATACTTCAAAGATTGTTATATTGAAGGAAGTGTGGACTTCATTTTTGGCAATAGCACTACACTTTTGGAGCATTGTCATATTCATTGTAAGTCTGCAGGGTTCATAACTGCACATAGCAGAAAATCTCAACAGGAAACAACAGGTTATGTTTTCCTAAGATGTGTTATAACAGGTAATGGAGGAACATCATATTCATATCTTGGAAGACCATGGGGATCTTTTGGAAGAGTAGTATTTGCTTTCACTTATATTGATCAATGCATAAAACTTGTTGGTTGGAATAATTGGGGGAAAACTGAGAATGAGAAGAGTGCTTGCTTTTATGAATATAGGTGCTATGGACCTGGTTGGTGCCCATCGAAAAGAGTTGCATGGGCAAGAGAATTGGTGGATAAAGAAGCACAACAATTCCTCATGCATCGCTTCATTGACCCAGAACCACAAAGACCTTGGCTTGCTCAAAAAATGGCATTGAAGATTCCATATTCTGCTTAG 957 0.4284 MAASPSVLTVSHDGTGHYKTVQEAINAVPLGNTRRTIIRVSPGTYKQPLYVAKTKNFITLSGICPEETVLTWNNTATKIQHHQGDKVIGTGTFGCGSVIVEGSDFIAENITFQNSSPQGSGQAVALRVTADRCAFYNCRFLGWQDTLYLHYGKQYFKDCYIEGSVDFIFGNSTTLLEHCHIHCKSAGFITAHSRKSQQETTGYVFLRCVITGNGGTSYSYLGRPWGSFGRVVFAFTYIDQCIKLVGWNNWGKTENEKSACFYEYRCYGPGWCPSKRVAWARELVDKEAQQFLMHRFIDPEPQRPWLAQKMALKIPYSA 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g1431 318 ProSitePatterns Pectinesterase signature 2. 161 170 IPR033131 -
Lal12g1431 318 PANTHER PECTINESTERASE 5 317 - -
Lal12g1431 318 Gene3D - 4 313 IPR012334 -
Lal12g1431 318 SUPERFAMILY Pectin lyase-like 2 305 IPR011050 -
Lal12g1431 318 Pfam Pectinesterase 9 298 IPR000070 GO:0030599|GO:0042545
Lal12g1431 318 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 5 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g1431 Lal-Chr12 17481786 17485372 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g1431 3 312 Carbohydrate Esterase AT1G69940 37.539 1.96e-69 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g1431 K01051 - cit:102623565 572.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g1431 12 17481786 17485372 Lal12g1431 12 17481786 17485372 ECH