Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g1409 ATGTCTTCCTCAACTTCTCTCAAAGTTCACCATGTCTACTCGGTGGCGCCGCCAGATGGAACCACCGCAACCACTTTTCCCCTCACCTTCTTTGATGTACTATGGCTTAGATTCCCACCAGTTGAACGTCTTTTCTTCTATGAATTCCCAAACTCTAAAACAACAACAACCAATTCATTCTTTGATATCATTGTTCCAAATCTGAAACACTCTCTTCAACTCACACTCCAACACTTTATTCCTCTTGCTGGTAACATCACTTGGCCTCTTGAATCATCTAAACCCTTTATCAACTATGTCCCTGGTGATACTGTCCCTTTCACTGTTGCTGAATCTGAAGCTGATTTCAACCATCTTTCTTCCAATCTTTGTGACGTTGTGGACCGTGAAAATTTAATACCTCGCTTGAATATTTCTCAGGCACAAGCATCTATTCTAGCCCTCCAAGTTACACTCTTTCCGAATTTAGGGTTTTGTATTGGAATAACAACACATCATGCTGCTGTGGATGGAAAATCCTCGACCATGTTTTTGAAAACATGGGCCTATATTTGTTCCAAACTCGAACCTTTAACAGAATCATCATTACCATGTTTATCATTACGTGAAGATTTGATTCCTTTCGTTGATAGATCAGTGGTAAGTGATCCCATAGGAATCACTGAAGCCTATGTTGATAGTTGGTTGAATGATGAACAAGGACGAAATAATCGAAGCCTCAAAGTGTGGGATTCTATCAATGAAGCGAAGAAAGAACAAGTTAAAGGTTTGTTTGAATTAACACCGTCGCATATCCAAAAGCTGAAGCATTATGCACAATCGAAGGTGAAAGTTAAGGTATCAACGTTTTCTGTTACATGTGCTTATTTGTTAGCATGTTTAGTCAAAGTAGAAAAACCAAAGACTGATAAAGTAGCATTCATATTTAGTGTGGATTGTAGATCCCGTTTGGACCCACCAATTTTGCCAACATATTTTGGGAACTGTGTTTTGCCTCAAATAGTTATTGCTGAGACAAATAAGTTATTAGGGAAGGATGGGTTTATTAATGCTCTAGAAAGTGTAGTTGATGTTTTGAATAAGATGGACGATGGAATGCTAAATGAAGCAAAAAATTGGATGACAAAAGTACAATCTGCATTAGAGGGTAGATTGTTTTCTACTGCTGGGTCTCCAAGGTTTGAGGTTTATGGTATTGATTTTGGATGGGGAAGGCCTAAAAAAGTGGATGTTTCTTCTATTGATAGAACAGGAGCATTTTCTCTTTCTGAAAGTAAGAAGAATGATGGAGGAGTTGAGATTGGTTTGGCTTTGAAGAAGGATGAAATGGAAGCTTTTGCTGCTCTTTTTGATCAACAAATTCAATCCTTTTAA 1374 0.3814 MSSSTSLKVHHVYSVAPPDGTTATTFPLTFFDVLWLRFPPVERLFFYEFPNSKTTTTNSFFDIIVPNLKHSLQLTLQHFIPLAGNITWPLESSKPFINYVPGDTVPFTVAESEADFNHLSSNLCDVVDRENLIPRLNISQAQASILALQVTLFPNLGFCIGITTHHAAVDGKSSTMFLKTWAYICSKLEPLTESSLPCLSLREDLIPFVDRSVVSDPIGITEAYVDSWLNDEQGRNNRSLKVWDSINEAKKEQVKGLFELTPSHIQKLKHYAQSKVKVKVSTFSVTCAYLLACLVKVEKPKTDKVAFIFSVDCRSRLDPPILPTYFGNCVLPQIVIAETNKLLGKDGFINALESVVDVLNKMDDGMLNEAKNWMTKVQSALEGRLFSTAGSPRFEVYGIDFGWGRPKKVDVSSIDRTGAFSLSESKKNDGGVEIGLALKKDEMEAFAALFDQQIQSF 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g1409 457 Pfam Transferase family 11 448 - -
Lal12g1409 457 Gene3D - 250 457 IPR023213 -
Lal12g1409 457 PANTHER - 1 456 - -
Lal12g1409 457 Gene3D - 7 240 IPR023213 -
Lal12g1409 457 PANTHER MALONYL-COA:ISOFLAVONE 7-O-GLUCOSIDE MALONYLTRANSFERASE 1 456 - -
Lal12g1409 457 SUPERFAMILY CoA-dependent acyltransferases 258 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g1409 Lal-Chr12 17257831 17259204 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g1409 44 446 Monolignol Biosynthesis Gene Families AT5G48930 26.777 6.17e-26 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g1409 - - gmx:100785084 531.176