Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g1408 ATGTCTAAGAAAGTTTTGAGAAGCAAGAAGGATGAAAAATCAGATTTGCAGAAGCAGATTGGTTGCATCAGTGGATTCTTTAAGCTGTTTGATAGCCAAAGGTTCCTCACAGATCAAAGCAGTGGAAGCAGTCAGAGTCAGAACAGAACTAACCCAGGACTAGGTGGAACAAGTAATCACATCAAAGAGCTGAATAGTACAATGCAAAAGGGAGAGGCAAAGAAGAATGTGTTTGTTGCAAGAGAGAATCAACAATTCTCAACAGAATCATCAGGAACTTCTGTATTTTCATCGTCGTGTTCATCGAGCATGTCATCACTCGAGTTTAACCGAACAATTCAAATAGAACAACCATCAATGATTCCAATCAAAATTTCAGAAAGTTCCAATGCAGCTGCAGCAATGAAGCAACTAGATTTCTATGATGTTGTGAAAGGCTCAATGCATAAAGAATTCAAAGGATTGTCAGTGAAAACAATTGCTAGAGACGAAAAGATCGGCCGTGCCATAAAATTCGTAGACTCTCCAAGGCCTTTGCAGCCATACAAATCTGTCAATGAACATTTCCATAATAGACCTTGGGATTCACCAAGGCTATCTTATGATGGGAGGGATATGCGAGATACGTTTAAATCCGGTACGAGGCACACGGAACTCCCGAGGCTTTCCTTGGATAGCAGGCAAGGACCCTTTAAGGGTATCAATGAGGGAACAAAATCTAACAACCTTTTGAAGGGTCAGCATAAAGGGTATGTAGGCTCTAGCACAATGGTTAAACAGCTGCAAGAATCCGAAACTCCGAAAAGAAATTCATCGAGTGTTGTAGCTAAGTTAATGGGACTGGAAGCCTTCACAGATGTGACACAAACTTGTGATAGTCCTCCACGAGTGTTCCCTAGCATGAGTGATGAATACAGGCAATACCGAAGTTCTGTATCGCCGAGGACAAGGAAGGAGAATACTATGCCTCAATCCAGGAGTGATGCTTCAGTCACAACTGTGACAACAAATGCAAGCCATGGTTCTCAATTGCAGGCTTCCAAGGGAAGTGAATCTTCAATAAAAGTCGCGAATAATGGCCTATCTGTATACGGGGAAATCGAGAAAAGGATGGCGAATCTTGAGTTCAAAAATTCTGGAAAGGATCTTAGAGCGCTTAAACAGATTCTTGGCACGATGCAAAGATATAAAGATACATTAGATATATCAAAAGATCAGGCTTCAAATTCGCCATACCACAGTAGGAGTAATAGTAGTCTCAGTGAAAGATCCAAAGTACAAAGCCCAAGAATAAGACAGAAGGATCCAACATCTATGAAGTCAAATTCGAACAATGTTAGTAAATCGCCGATTGTGATCGTGAAACCCGCAAAAGTTACTAGAGAAACCAATAATCCCGGTAATCACACGAATGGAAGATTGTTTGACAAGCATGATGGACAAAAAGCAAAAGGTATGAGTCCAACAAGCAGATATAACAAGGATTCTTTTAGTCAAGCTTTTCATTCAGAAGAAAAGAGTACTAAGGTGAGAACTTCAAAGTTGATGCAACCCTCAAAAGTTCCTCAAGTCATCAATAAAGAAAACAGCATTAACTGCAGCAATACATCAGAGACAAGGAGCCCGAGACTACAAAAGAAGTTCGGTTTGGAGAGGCGTTCGCCACCGAGAAGTCCATCACCAGATTCGAGCAGTAACAGTAGACAACACAATAGACAATCATTGGAATTGGCTTCCCTGAGTACGACACCTAGACAAAAATTCTCTACTTTTCATGAAAAAAATGTTTGTTTCACCGCGCTTGGCTATCAAAGGACGGACATTAAGCAGGATGTTGATGTTAGTTCCCAAGATTCCGACAGCAAAAGAAGCATGGACTCTCACAATGACATAGTAGTCATTCATGTTGATCATTCTGAAAAGAGCAATACCGACTTCACTCATCCGAATGGACTGAATCAAAATAATGCGACGAAAGAGTTCGGAAAGGATAGCTTCATGGGCAAGAAAATAGTTACTGCAGAACAACCAAGTCCTGTGTCTGTTCTTGATGCTGCATTTTACATAGAAGATCCACCTTCTCCAGTTAAAAAGAAATCAGACATCTCAAAAGATCTAGATGAAACTCTAAATGCTTATGATAGTAGCGACGAGAACTCGCAAGATATTCAGCAAATTGACTACAACGAGAAATTACCGAATTTCGGTAACAGGAAGGATCCTGATCATAAATATATATCAGAAATACTGTTAGTATCAGGGCTGCTTAGCAGTGCTGGCTATAGTCAGGCAGTGAATTCACAAGCTCACCCGATTAACCCGAAGTTGTTCCTTGCTCTAGAGCAAGCCAAGGCTAGCAAGTTGCATTTCAATGATCCTGAGCAAATGCAAAGAAAACTCATATTTGATGTTGTGAATGATATTCTAGTTCAAAAGCTGATATTGGAGAATTCTTCCACACAATGGTGCTTGCCAAATCAACCATCAGGGAGAAAACTAAAAGGGCATCATCAGATTCTGAATGATATTTTCACAGAAATAGATAAGTTACAACATGAAGATAGGAATTTCAGCAGTGACAATGAAGAAGAGTATTTGAATAACCTTCTATGGGAGGATTTAATGCATCAACCCAAAATTTGCATAGAGATACCTAATGTTGTGTTGGATATTGAAAGATTGATCTTTAAAGATTTGATAACTGAAGTTGTGAGAAGTGAAGTAGCTAACTATCCTCCAAGGCATTGCAGGCAACTACAATATCTCAAGTAG 2772 0.399 MSKKVLRSKKDEKSDLQKQIGCISGFFKLFDSQRFLTDQSSGSSQSQNRTNPGLGGTSNHIKELNSTMQKGEAKKNVFVARENQQFSTESSGTSVFSSSCSSSMSSLEFNRTIQIEQPSMIPIKISESSNAAAAMKQLDFYDVVKGSMHKEFKGLSVKTIARDEKIGRAIKFVDSPRPLQPYKSVNEHFHNRPWDSPRLSYDGRDMRDTFKSGTRHTELPRLSLDSRQGPFKGINEGTKSNNLLKGQHKGYVGSSTMVKQLQESETPKRNSSSVVAKLMGLEAFTDVTQTCDSPPRVFPSMSDEYRQYRSSVSPRTRKENTMPQSRSDASVTTVTTNASHGSQLQASKGSESSIKVANNGLSVYGEIEKRMANLEFKNSGKDLRALKQILGTMQRYKDTLDISKDQASNSPYHSRSNSSLSERSKVQSPRIRQKDPTSMKSNSNNVSKSPIVIVKPAKVTRETNNPGNHTNGRLFDKHDGQKAKGMSPTSRYNKDSFSQAFHSEEKSTKVRTSKLMQPSKVPQVINKENSINCSNTSETRSPRLQKKFGLERRSPPRSPSPDSSSNSRQHNRQSLELASLSTTPRQKFSTFHEKNVCFTALGYQRTDIKQDVDVSSQDSDSKRSMDSHNDIVVIHVDHSEKSNTDFTHPNGLNQNNATKEFGKDSFMGKKIVTAEQPSPVSVLDAAFYIEDPPSPVKKKSDISKDLDETLNAYDSSDENSQDIQQIDYNEKLPNFGNRKDPDHKYISEILLVSGLLSSAGYSQAVNSQAHPINPKLFLALEQAKASKLHFNDPEQMQRKLIFDVVNDILVQKLILENSSTQWCLPNQPSGRKLKGHHQILNDIFTEIDKLQHEDRNFSSDNEEEYLNNLLWEDLMHQPKICIEIPNVVLDIERLIFKDLITEVVRSEVANYPPRHCRQLQYLK 923
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g1408 923 MobiDBLite consensus disorder prediction 306 352 - -
Lal12g1408 923 MobiDBLite consensus disorder prediction 557 583 - -
Lal12g1408 923 Pfam Domain of unknown function (DUF4378) 742 902 IPR025486 -
Lal12g1408 923 PANTHER LONGIFOLIA PROTEIN 1 724 IPR033334 GO:0051513
Lal12g1408 923 PANTHER LONGIFOLIA PROTEIN 723 921 IPR033334 GO:0051513
Lal12g1408 923 PANTHER LONGIFOLIA PROTEIN 1 724 - -
Lal12g1408 923 PANTHER LONGIFOLIA PROTEIN 723 921 - -
Lal12g1408 923 MobiDBLite consensus disorder prediction 512 543 - -
Lal12g1408 923 MobiDBLite consensus disorder prediction 38 61 - -
Lal12g1408 923 MobiDBLite consensus disorder prediction 403 450 - -
Lal12g1408 923 MobiDBLite consensus disorder prediction 224 246 - -
Lal12g1408 923 MobiDBLite consensus disorder prediction 401 583 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g1408 Lal-Chr12 17205734 17210772 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g1408 1 916 TRM (TON1 Recruiting Motif) Superfamily AT5G15580 29.904 4.09e-78 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g1408 - - lang:109346929 1529.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g1408 12 17205734 17210772 Lal12g1408 12 17205734 17210772 ECH
Lal12g1408 12 17205734 17210772 Lal13g1768 13 17242638 17248403 LSH