Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g1404 ATGAGCTTCAACTATAGTTCCCTAATAGTAACTACAAAAATTCTCCTCTGCCTCTCTTTTTCTCTCTTCTTCTACCTTCCAAAACAACTTGATGCTTATGACCCACTTGTTAAATTTAGCATCAATTGTGGCTCAAGTGGTAAATATTCAGATTCTGATAGAACTTGGATAGGAGACATAAACTCAAAACTCTTGTTATCTCACTCAGTTCAAGTTGCTGAAGCAAAAACACTATCAAATTCTATTACCCAAGTTCCTTATTCTACTGCTACACTTTCTTCATCTCAATTCAATTATTCATTCCCAGTTATTCAAGGACCAAACTTTCTTCGCCTTTTCTTCAACCCATCTTCATATTTAAACTTCAACCGCACTAATTCTATGTTCACAGTTCAATCTAATGGTTTCACCCTCTTGAAAGATTTCAATGCTTCATTCATTGTTGATGCTGATGCTGATGCTGAAGGGAATGATGTTATATTCAAAGAGTATATAATAAATGTTGATGATTCTCAATGGCTTAACTTGACCTTTACTCCAAACATATCTTTTCCAAATTCATATGCTTTTGTTAATGGAATTGAGGTTGTGTCTATGCCATTTGATCTATATTATAATTCAGCTTATTCCAATAATGAAGGATTCAAATATGTGGGAAGCACCACTACCCTATACAAGCTTAGTAACAACACTGCCATGGAGACAGAATACAGGGTGAAGGTTGGAGGGGAAGCAATACCTCCAAATAATGACACAGGTCTTCTAAGGAAATGGGATGGAAATGATTTTGATTATTTAACAACAAAATCATTTCAATACACTGGTTTGAATCTCAACCACCCTCTCTCTTTCACTATCATCCCTAATTACACTGCACCTGAATTACTCTACAAAACATGGAGAGAAATGGGATTAAATTCTACTCTCAACAAGATTTCTAACATGACTTGGGTTTTCACTCTTCATACCGGTTTCACTTACATTTTCAGGCTTCATTTTTGTGAACTAAGTCAAAACATTACTTATTCTAGTGACAGAGCTTTTATCATCTACATCGCGGAACAACTTGCTGAGGAACGCGCTGATGTTATTAAATGGACTCAACTAAAGGGTACCCCGGTGTATAAAGACTACGCTGTTTTCGTTTCAGGGGATCACAAAAAAATAACTAACGTTTCTCTTCAATTGCACCCTTTTACTAATCATTTTGATAATAAATTCAGTGACCCGTTTCTTAATGGTTTTGAAATCTTCAAATTAAGCGACCCAGGGACTAAGAACCTAGCTGACCCGGTTCAAGTAAACCCGGTTCAAGTAAACCCGGTTCAGGAAAAAAAGAGTGGTAACAGTGGGAGGTTGAAGAAGAGAGTTGTTATTGCAGGTGTTATATCCGGCGTCGTTTTGGTCTTAATTATTGGTTTATTATTATTCATTATTATGAGAGGAAAGAAGAAAAAACAAAGTAAGGTGAGAAAGTCAATTACCGACGTGGCATCGAAGTGGGGTCCAGTTTCAGTTTCAACGACTAAGTCAACGAACACAAACAACTCATCTCTACCGTTAGATCTATGCCGTGAATTCACCTTCACTGAGATCAAAACCGCAACGAACAACTTCGACGAAGTTTTCATCGTCGGTGCCGGAGGATTCGGACACGTCTACAAAGGCTACATCGACGGTGGATCAATCCCCGTCGCAATCAAACGGTTGAAACCTGGTTCACAACAAGGAGCACAAGAATTCACGAACGAGATTCACATGCTATCTCAGCTTCGTCACCTTCATCTCGTTTCACTAATCGGTTACTGCAACGAGAATAACGAGATGATACTCGTTTACGATTTCATGACACGTGGAACTCTCAGGGAGCATCTCTATAACACTGATAATGCTCCTCTGTCGTGGAAGAAGCGGTTACAGATTTGTATAGGAGCGGCGCGTGGGCTTCACTACCTTCACACAGGTGCGAAAAACATGATAATACACCGTGACGTTAAAACAACGAATATATTAATCGATGAGAAATGGGTAGCGAAGGTTTCTGATTTTGGGCTTTCACGAATTGGGCCTAGTGGAATATCAAAGGCCCATGTAACAACAATGGTTAAAGGAAGCGTTGGTTATTTAGATCCAGAGTATTATAAACGACAGCGTTTAACTGAGAAATCTGACGTGTACTCATTTGGGGTGGTGTTGTTTGAGGTACTGTGTGCTCGTCCACCTGTGATTAGAACTGGGGAGAAGAGACAGGTGTCACTCGGTGATTGGGCGAAGAAGTGTTGGAAAAGTGGGACCCTTGAAGAGATAGTGGACCCAAGTTTGAAGGGTAAAATAGGAAAAGAGAGTTTAAAGAAGTTTGGTGAGATAGGTGTGAGTTGTTTGGTGGAAGATGGAAGAGAAAGGCCATCAATGAACGACGTCGTTTGGATGTTGGAGTTTGCGTTACAGTTACAAGAGAATGCTGAGAATGTTATTTGTGAAGTTGGGAATAGAGAAGAGAATAATGATAATGATAATGATGATGTTATGTTTAGTAGTAGTGGGAACAGTGTGGGACAAGTTTCTGATTTTTTGTATAATAAAAGTAATGGAGTGAGTGATACTACTACTAGTACTACCTACAATGTTAGTAATAGTAGCACTTCTCATGATAAAGACAGTGATAGGTTCATGTCTGGGACTGTTTTTTCTGAGATTATAGACCCAAAGGCACGTTAA 2718 0.3893 MSFNYSSLIVTTKILLCLSFSLFFYLPKQLDAYDPLVKFSINCGSSGKYSDSDRTWIGDINSKLLLSHSVQVAEAKTLSNSITQVPYSTATLSSSQFNYSFPVIQGPNFLRLFFNPSSYLNFNRTNSMFTVQSNGFTLLKDFNASFIVDADADAEGNDVIFKEYIINVDDSQWLNLTFTPNISFPNSYAFVNGIEVVSMPFDLYYNSAYSNNEGFKYVGSTTTLYKLSNNTAMETEYRVKVGGEAIPPNNDTGLLRKWDGNDFDYLTTKSFQYTGLNLNHPLSFTIIPNYTAPELLYKTWREMGLNSTLNKISNMTWVFTLHTGFTYIFRLHFCELSQNITYSSDRAFIIYIAEQLAEERADVIKWTQLKGTPVYKDYAVFVSGDHKKITNVSLQLHPFTNHFDNKFSDPFLNGFEIFKLSDPGTKNLADPVQVNPVQVNPVQEKKSGNSGRLKKRVVIAGVISGVVLVLIIGLLLFIIMRGKKKKQSKVRKSITDVASKWGPVSVSTTKSTNTNNSSLPLDLCREFTFTEIKTATNNFDEVFIVGAGGFGHVYKGYIDGGSIPVAIKRLKPGSQQGAQEFTNEIHMLSQLRHLHLVSLIGYCNENNEMILVYDFMTRGTLREHLYNTDNAPLSWKKRLQICIGAARGLHYLHTGAKNMIIHRDVKTTNILIDEKWVAKVSDFGLSRIGPSGISKAHVTTMVKGSVGYLDPEYYKRQRLTEKSDVYSFGVVLFEVLCARPPVIRTGEKRQVSLGDWAKKCWKSGTLEEIVDPSLKGKIGKESLKKFGEIGVSCLVEDGRERPSMNDVVWMLEFALQLQENAENVICEVGNREENNDNDNDDVMFSSSGNSVGQVSDFLYNKSNGVSDTTTSTTYNVSNSSTSHDKDSDRFMSGTVFSEIIDPKAR 905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g1404 905 ProSitePatterns Protein kinases ATP-binding region signature. 545 568 IPR017441 GO:0005524
Lal12g1404 905 SUPERFAMILY Protein kinase-like (PK-like) 512 814 IPR011009 -
Lal12g1404 905 MobiDBLite consensus disorder prediction 868 889 - -
Lal12g1404 905 SMART serkin_6 539 814 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal12g1404 905 Pfam Malectin-like domain 41 419 IPR024788 -
Lal12g1404 905 Pfam Protein tyrosine and serine/threonine kinase 545 808 IPR001245 GO:0004672|GO:0006468
Lal12g1404 905 Gene3D - 37 200 - -
Lal12g1404 905 Gene3D - 231 421 - -
Lal12g1404 905 Gene3D Phosphorylase Kinase; domain 1 501 615 - -
Lal12g1404 905 CDD STKc_IRAK 545 812 - -
Lal12g1404 905 ProSiteProfiles Protein kinase domain profile. 539 814 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal12g1404 905 ProSitePatterns Serine/Threonine protein kinases active-site signature. 660 672 IPR008271 GO:0004672|GO:0006468
Lal12g1404 905 PANTHER RECEPTOR-LIKE PROTEIN KINASE FERONIA 22 842 - -
Lal12g1404 905 Gene3D Transferase(Phosphotransferase) domain 1 616 837 - -
Lal12g1404 905 PANTHER OS07G0166700 PROTEIN 22 842 IPR045272 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g1404 Lal-Chr12 17158758 17165357 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g1404 33 905 Receptor kinase-like Gene Family AT3G51550 46.844 0.0 733
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lal12g1404 Malectin_like 1.7e-28 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g1404 - - gsj:114381619 980.319
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g1404 12 17158758 17165357 Lal12g1404 12 17158758 17165357 ECH