Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g1398 ATGGCTACTATCTTCATTGCAATTCTTGGGTTAGTCTTGGTGCTATGTTTTTGCTCTATTCTATTGAGGTGGAATGAAGTTAAGTACAGGAACAAAGGTTTACCTCCTGGTACAATGGGTTGGCCTCTTTTTGGTGAAACAACTGAGTTTCTTAAACAAGGTCCTAACTTCTTGAAAACTCAAAGAGCAAGGTATGGCAATTTGTTCAAATCTCACATATTAGGGTGTCCTACAATTATATCAATGGATCCAGAACTTAATAGATACATCCTAATGAATGAATCAAAAGGACTTGTTCCTGGTTACCCACAATCTATGTTAGATATCTTAGGAAAATGCAATATTTCAGCTGTTCATGGCTCCACTCACAAGTACATGAGAGGAACACTTCTTTCTATCATTAGTCCTACTTTGATTAGAGATCAACTTTTGCCAAAAATTGATGACTTTATTAGAGCCCATTTAAGCAATTGGGATGGCAAAGTTATCAACATTCAAGATAAAACTAAAGAGATGGCTTTCCTCTCGTCTTTGAAGCAGATTGCTGGCATGGAATCAAGTTCAATATCTTACTCATTCATGACAGAGTTCTTTAAGCTAGTTCTAGGAACTCTTTCACTCCCTATCGATCTCCCTGGAACAAATTATCGTCGCGGATTTCAGGCAAGGAAGAATATTATCAACATTGTGAGTCATATATTAGAGGAAAGAAGAGCATCACAAGAATGTTACCAAGACATGCTTGGTTGCCTTATGAGAAAGGATGAAAATAAATATAAACTAAGTGATGAAGAAATTATTGATCTAGTAATTACACTTATGTATTCTGGTTATGAAACTGTTTCAACTACATCAATGATGGCAGTGAAATATTTACATGATCATCCTAAAGTTCTTGATGAACTTAGAAAAGAGCATTTGGCCATAAGAGAAAGAAAAAAATCAAATGACCCAATTGATTACAATGATCTCAAGTCAATGAAGTTTACTCGTGCAGTAATTTTTGAGACCTCGAGATTGGCCACAATAGTTAATGGGGTCCTAAGGAAAACCACTAAAGACATGGAACTAAATGGATATTTGATTCCCAAAGGGTGGAGAATATATGTATATACAAGAGAGATAAATTATGACCCAATTCTCTATCCTGATCCACTAAAATTCAACCCATGGAGATGGATGGACAAGAGTGTAGAGTCACAAAACTATTTCTTTATATTTGGAGGAGGCACTAGGCAATGTCCTGGAAAAGAGTTGGGAATAGCAGAAATTTCAACTTTCTTACACTACTTTGTAACTAGATACAGGTGGGAAGAAATAGGAGGAGAAAAAGTAATGAAATTTCCTAGAGTTGAGGCACCAAATGGATTGCATATAAGGGTCTCATCTCTTACTAATTAA 1401 0.3576 MATIFIAILGLVLVLCFCSILLRWNEVKYRNKGLPPGTMGWPLFGETTEFLKQGPNFLKTQRARYGNLFKSHILGCPTIISMDPELNRYILMNESKGLVPGYPQSMLDILGKCNISAVHGSTHKYMRGTLLSIISPTLIRDQLLPKIDDFIRAHLSNWDGKVINIQDKTKEMAFLSSLKQIAGMESSSISYSFMTEFFKLVLGTLSLPIDLPGTNYRRGFQARKNIINIVSHILEERRASQECYQDMLGCLMRKDENKYKLSDEEIIDLVITLMYSGYETVSTTSMMAVKYLHDHPKVLDELRKEHLAIRERKKSNDPIDYNDLKSMKFTRAVIFETSRLATIVNGVLRKTTKDMELNGYLIPKGWRIYVYTREINYDPILYPDPLKFNPWRWMDKSVESQNYFFIFGGGTRQCPGKELGIAEISTFLHYFVTRYRWEEIGGEKVMKFPRVEAPNGLHIRVSSLTN 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g1398 466 Pfam Cytochrome P450 35 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal12g1398 466 SUPERFAMILY Cytochrome P450 29 448 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal12g1398 466 PANTHER CYTOCHROME P450 26 7 462 - -
Lal12g1398 466 PANTHER CYTOCHROME P450 FAMILY PROTEIN 7 462 - -
Lal12g1398 466 Gene3D Cytochrome P450 25 464 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal12g1398 466 PRINTS P450 superfamily signature 276 293 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal12g1398 466 PRINTS P450 superfamily signature 332 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal12g1398 466 PRINTS P450 superfamily signature 405 414 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal12g1398 466 PRINTS P450 superfamily signature 414 425 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal12g1398 466 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 407 416 IPR017972 GO:0005506|GO:0016705
Lal12g1398 466 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal12g1398 466 PRINTS E-class P450 group I signature 265 282 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal12g1398 466 PRINTS E-class P450 group I signature 331 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal12g1398 466 PRINTS E-class P450 group I signature 371 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal12g1398 466 PRINTS E-class P450 group I signature 404 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal12g1398 466 PRINTS E-class P450 group I signature 414 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g1398 Lal-Chr12 17067158 17071048 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g1398 82 462 Cytochrome P450 AT5G38970 70.942 0.0 574
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g1398 K09590 - gmx:100805958 843.188
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g1398 12 17067158 17071048 Lal12g1398 12 17067158 17071048 ECH