Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g1397 ATGGCTAATGCTTTTGTTGCACCACCACCACCATTGAAAGATGAGCTTGATATTGTGATACCTACAATAAGAAACCTTGATTTTCTTGAAATGTGGAGGCCATTTTTTCAACCTTATCATTTGATCATTGTTCAAGATGGTGACCCATCAAAAACCATTAAGGTCCCTTCTGGTTTTGATTATGAGCTTTATAACCGTAATGATATCAACAAGATTCTTGGTCCTAGGTCATCTTGTATCTCCTTCAAAGATTCTGCTTGTCGTTGCTTTGGTTACATGGTGTCTAAGAAGAAATATATCTTCACCATTGATGATGATTGCTTTGTGGCTAATGATCCATCTGGAAAAGCTGTTAATGCACTTGAGCAACATATTAAGAACCTTCTATGTCCATCAACACCATTGTTTTTCAATACTCTCTATGACCCTTTCAGAGAAGGTGCAGATTTTGTTCGTGGCTACCCTTTCAGTCTTCGTGAAGGTGTACCCACGGCTATTTCTCATGGACTCTGGCTTAACATCCCTGATTATGATGCTCCCACACAGCTTGTCAAGCCTCTTGAAAGGAACACTAGGTATGTGGATACTGTTCTTACCATTCCTAAAGGAACATTGTTTCCAATGTGTGGAATGAATTTGGCATTCGATCGTGATCTTATTGGACCAGCAATGTACTTTGGTCTCATGGGAGATGGTCAACCAATTGGACGCTATGATGACATGTGGGCTGGTTGGTGCTGCAAGGTAATATGTGATCACTTGGGGCTAGGAATCAAGACTGGTTTGCCTTATATATATCACAGCAAAGCAAGTAACCCATTTGTGAACCTTAGGAAAGAGTACAAAGGCATATTCTGGCAAGAAGATATTATTCCATTCTTTCAAAGTCTTACTCTTCCAAAAGAAGCCACTAGTGTTCAAAAATGCTATATTGAACTTTCTAAGCAAGTCAAGGAAAAGCTCTCAAAGATAGATCCTTACTTTGACAAGTTAGCAGATGCTATGGTCACTTGGATTGAAGCTTGGGATGAGCTTAACCCACAAGGAGCATCTCAGGCCAATGCCAAAGCATAA 1074 0.3994 MANAFVAPPPPLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPSKTIKVPSGFDYELYNRNDINKILGPRSSCISFKDSACRCFGYMVSKKKYIFTIDDDCFVANDPSGKAVNALEQHIKNLLCPSTPLFFNTLYDPFREGADFVRGYPFSLREGVPTAISHGLWLNIPDYDAPTQLVKPLERNTRYVDTVLTIPKGTLFPMCGMNLAFDRDLIGPAMYFGLMGDGQPIGRYDDMWAGWCCKVICDHLGLGIKTGLPYIYHSKASNPFVNLRKEYKGIFWQEDIIPFFQSLTLPKEATSVQKCYIELSKQVKEKLSKIDPYFDKLADAMVTWIEAWDELNPQGASQANAKA 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g1397 357 PANTHER UDP-ARABINOSE MUTASE 7 353 IPR037595 -
Lal12g1397 357 PANTHER ALPHA-1,4-GLUCAN-PROTEIN SYNTHASE [UDP-FORMING]-LIKE PROTEIN 7 353 - -
Lal12g1397 357 PIRSF UPTG 6 350 IPR004901 GO:0016866|GO:0071669
Lal12g1397 357 SUPERFAMILY Nucleotide-diphospho-sugar transferases 18 246 IPR029044 -
Lal12g1397 357 Pfam Reversibly glycosylated polypeptide 13 346 IPR037595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g1397 Lal-Chr12 17058079 17061579 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g1397 K13379 - gmx:100778357 727.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g1397 12 17058079 17061579 Lal19g1439 19 17032219 17034484 ECH
Lal12g1397 12 17058079 17061579 Lal12g1397 12 17058079 17061579 ECH
Lal12g1397 12 17058079 17061579 Lal13g1755 13 17099348 17101914 ECH
Lal6g0776 6 5210526 5213926 Lal12g1397 12 17058079 17061579 ECH
Lal22g0685 22 4876432 4878809 Lal12g1397 12 17058079 17061579 ECH
Lal18g0937 18 12196915 12200319 Lal12g1397 12 17058079 17061579 ECH
Lal12g1397 12 17058079 17061579 Lal6g0776 6 5210526 5213926 PCT
Lal6g0776 6 5210526 5213926 Lal12g1397 12 17058079 17061579 PCT