Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g1395 ATGACTATTGGAAGCTTTGTTGAGAAGAGAACATCAAGAAAAAACAAGGCACTTATTGATAACAATGCACCTTTGATACCTAAGACTCATCCAAAATCTGATGCTGGGTTTGATGATGTTAATGGAGCTTCATTTTATGGAGCTGTTATTAACTTATCCACCTCAATTATTGGTGCTGGTGTCATGTCCTTGCCTGCAACAGTGAAAGAGTTGGGAATGGTGCCTGGTCTTCTTGCTATCATTTTCATGGCTTTCTTGACTGATAAGTCAATTGAGTTTATGATCAGGTTTTCAAGGGCAGGGAACCTCACTTCTTATGGTGGCCTAATGGGGGATGCATTTGGGAAATATGGAACAGCTCTTGTGCAGATATGTGTTATAATCAACAACATTGGTGTTCTTATTGTTTACATGATTATTCTTGGTGATGTGCTCTCTGAAACTTCTTCTGGTGGAGAGCACCATTCTGGTATTCTTGAAGGATGGTTTGGTGTACATTGGTGGACTGGTCGTACTTTTGTTCTCCTTTTAACAACACTACTTGTGTTTGCACCTTTGGTTAGCTTTAAACGAATTGATTCACTGAGATTCACTTCTGCACTATCAGTTGGACTAGCAATTGTTTTTCTCATCATCGCGGTCGGAATCGCAGTTGTCAAAATTATCAATGGAGGCATTGGGATGCCAAGACTCTTCCCAATCATTACTGATATGGCTTCATTCTTTAAATTATTCACTGTTGTTCCTGTGCTTGTGACTGCATATATCTGCCACTACAATGTTCACAGCATAGATAATGAACTCGAGGATTCATCGCAGATGCATAGCGTTGTACGCACTGCACTTACTCTATGCTCTTCCGTCTATATAATGACAAGCTTCTTTGGATTTCTCCTATTTGGTGAAGGAACTCTTGACGATGTTCTTGCGAATTTTGATACCGATCTTGGAATTCCTTTCAGTTCTGTACTCAATGACATTGTTCGACTTAGCTACGCTGCGCATCTCATGCTTGTATTTCCTGTTGTCTTCTATCCACTAAGGATCAACATAGATGGTCTCATATTTTCTAAGTCAAGACCTTTGGTTCTAGATAATTTCAGATTTGCATCAATTACTATTGCCCTTATTGGTGTTATCTTCCTTGGAGCAAATTTCATACCTAGCATTTGGGATGCTTTCCAGTTCACAGGAGCAACAGTTGCTGTTTGTGTAGGTTTCATATTTCCTGCTTCTATCACACTTAGGGATCGATACAACATAGTAACTAAACAAGACAAGATTATGTCTGTCATTATGATAGTCCTGGCAGTCTTCTCAAGTGTTGTGGCTATATATAGTGATGCCTTTGCCTAA 1356 0.3945 MTIGSFVEKRTSRKNKALIDNNAPLIPKTHPKSDAGFDDVNGASFYGAVINLSTSIIGAGVMSLPATVKELGMVPGLLAIIFMAFLTDKSIEFMIRFSRAGNLTSYGGLMGDAFGKYGTALVQICVIINNIGVLIVYMIILGDVLSETSSGGEHHSGILEGWFGVHWWTGRTFVLLLTTLLVFAPLVSFKRIDSLRFTSALSVGLAIVFLIIAVGIAVVKIINGGIGMPRLFPIITDMASFFKLFTVVPVLVTAYICHYNVHSIDNELEDSSQMHSVVRTALTLCSSVYIMTSFFGFLLFGEGTLDDVLANFDTDLGIPFSSVLNDIVRLSYAAHLMLVFPVVFYPLRINIDGLIFSKSRPLVLDNFRFASITIALIGVIFLGANFIPSIWDAFQFTGATVAVCVGFIFPASITLRDRYNIVTKQDKIMSVIMIVLAVFSSVVAIYSDAFA 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g1395 451 Pfam Transmembrane amino acid transporter protein 43 447 IPR013057 -
Lal12g1395 451 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 7 451 - -
Lal12g1395 451 PANTHER AMINO ACID TRANSPORTER 7 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g1395 Lal-Chr12 17041306 17046075 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g1395 18 451 Amino Acid or Auxin Permease AAAP Family AT5G38820 66.972 0.0 607
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g1395 K14207 - gmx:100796345 719.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g1395 12 17041306 17046075 Lal12g1395 12 17041306 17046075 ECH
Lal12g1395 12 17041306 17046075 Lal18g0555 18 4685347 4689226 PCT
Lal12g1395 12 17041306 17046075 Lal22g1289 22 15636260 15639544 PCT
Lal12g1395 12 17041306 17046075 Lal6g1608 6 18650445 18653709 PCT
Lal18g0555 18 4685347 4689226 Lal12g1395 12 17041306 17046075 PCT
Lal22g1289 22 15636260 15639544 Lal12g1395 12 17041306 17046075 PCT
Lal6g1608 6 18650445 18653709 Lal12g1395 12 17041306 17046075 PCT