Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g1387 ATGGCGTCTCCACCGGTGGTTCGGTTTCCGATCGTGGCGGCGGCGAGAGTGATCGGTGTTGTGATCACTGTTCTTCTCCTTACTTGGATACTACATTTCAGGGGTGGCATGGCTCTTGTTTCTGATAACAAAATTCTCATCTTTAATGTCCATCCAGTGTTGATGGTGATTGGACTTGTTCTACTTAATGGTGAAGGGATGCTTGCATATAAGACAATACCTGGAACCAAAAACTTCAAAAAAACTGTTCATCTCACATTACAGTTTCTTACTCTCATTCTAAGCATAATTGGTATCTGGGCTGCTTGGAAGTTTCATGTTGACAGAGGCATTGACAATTTCTACAGCCTGCATTCATGGTTGGGTCTTGTTTCCCTTTTCCTCTTCTCCATCCAGTGGGGTGCCGGCTTTGCGACATTTTGGTATCCGGGAGGCTCACGAAATAGTAGAGCTTCGCTATTGCCATGGCATGTGTTCTTCGGGATCTTTATTTATGTGTTGGCTATAACTACAACTGTTACTGGTTTTCTAGAGAAGGCTACATTCCTTCAATCCAGCAAGATCATATTGCGCTATTCCAACGAAGCACTGCTGATCAATTCCTTGGGCATTCTCGTTATCGTTTTAAGTGGCCTTGTCGTTCTTGGACTCGTTACGCCATCTAACGGTAATAGCAAAACAGATGCCATAAGGGGAAATGAGTAA 705 0.4383 MASPPVVRFPIVAAARVIGVVITVLLLTWILHFRGGMALVSDNKILIFNVHPVLMVIGLVLLNGEGMLAYKTIPGTKNFKKTVHLTLQFLTLILSIIGIWAAWKFHVDRGIDNFYSLHSWLGLVSLFLFSIQWGAGFATFWYPGGSRNSRASLLPWHVFFGIFIYVLAITTTVTGFLEKATFLQSSKIILRYSNEALLINSLGILVIVLSGLVVLGLVTPSNGNSKTDAIRGNE 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g1387 234 Gene3D - 1 230 - -
Lal12g1387 234 Pfam Eukaryotic cytochrome b561 50 182 IPR006593 -
Lal12g1387 234 PANTHER CYTOCHROME B561-RELATED 5 231 IPR043205 GO:0016491
Lal12g1387 234 SMART 561_7 50 176 IPR006593 -
Lal12g1387 234 ProSiteProfiles Cytochrome b561 domain profile. 14 218 IPR006593 -
Lal12g1387 234 CDD Cyt_b561_ACYB-1_like 41 184 - -
Lal12g1387 234 PANTHER B561, PUTATIVE-RELATED 5 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g1387 Lal-Chr12 16968796 16972346 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g1387 1 226 Chloroplast and Mitochondria Gene Families AT5G38630 64.159 5.84e-110 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g1387 K08360 - gmx:100787570 365.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g1387 12 16968796 16972346 Lal12g1387 12 16968796 16972346 ECH