Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g1386 ATGAAACTAAACAACACAAGATCATTACTCAATACCTCACCTATCACAACACTTTCACCCTTCACTTCATCAAACATACCTCTCACAAAATCTCTCAAACTAAACACCATTTCACCAAAGTCTCACCTTTTAGTACCCAACAAATCCTTCACATGTAGAAGCCAAGATGTGAGATCTGAATCAGATTTTGTAGTCAAAGTACAAGAACTTAATGTTTATGAGATCAATGAGAGAGATCGTGGAAGCCCTGCTTACCTTAGATTAAGTCAGAAAACTGAAAATTCCCTTGGTGATCTTGTCCCCTTTAGCAACAAGGCAAGTTACTTTCATTTCATCCTTTACTATATATATAGTGGATGTCTTCAAAAGCGCGTGGGGATCACAGCAGGTATATGTATTTTAATCCAAAACAAAGTTGAGAATAAAGGTGATAGATATGAAGCTATATTCAGCTTTTACTTTGGAGATTATGGTCACATTTCAGTGCAAGGATCATACCTAACATATGAAGATACTTATCTTGCTGTTACTGGTGGATCTGGTATATTTGAAGGAGTTTATGGTCAAGTTAAGCTGTATCAGCTTATATTCCCTTTTAAGCTATTTTACAAATTTTATCTTAAAGGGATTAAGGACTTACCTCAAGAGCTTATTGGTAATAAGCATGTTGAGCCTAGCCCAAGTGTTGAGCCTAGCCCTGATGCTAAGGCATGTGAGCCTCATGCTACTATTTCAGTAAGTGAGAGTATTGTTACGCATTTTCTCCAGATTTCAGTAAGTCAGAGCATTGTGACGTCTGAGAGCATTGTTATGCCTTTTCTCCCGATTTCATTAAATGAGAGCATTGTGACGCAATTTCTTTTACCTATGCAACGCTGA 879 0.372 MKLNNTRSLLNTSPITTLSPFTSSNIPLTKSLKLNTISPKSHLLVPNKSFTCRSQDVRSESDFVVKVQELNVYEINERDRGSPAYLRLSQKTENSLGDLVPFSNKASYFHFILYYIYSGCLQKRVGITAGICILIQNKVENKGDRYEAIFSFYFGDYGHISVQGSYLTYEDTYLAVTGGSGIFEGVYGQVKLYQLIFPFKLFYKFYLKGIKDLPQELIGNKHVEPSPSVEPSPDAKACEPHATISVSESIVTHFLQISVSQSIVTSESIVMPFLPISLNESIVTQFLLPMQR 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g1386 292 SUPERFAMILY Allene oxide cyclase-like 66 244 IPR034871 GO:0009695|GO:0046423
Lal12g1386 292 Gene3D - 52 246 IPR044859 -
Lal12g1386 292 PANTHER ALLENE OXIDE CYCLASE 7 245 - -
Lal12g1386 292 PANTHER ALLENE OXIDE CYCLASE 4, CHLOROPLASTIC 7 245 IPR009410 GO:0016853
Lal12g1386 292 Pfam Allene oxide cyclase 66 245 IPR009410 GO:0016853
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g1386 Lal-Chr12 16960409 16962122 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g1386 58 245 Acyl Lipid Metabolism Gene Families AT3G25780 63.158 5.33e-78 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g1386 K10525 - gmx:100803666 343.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g1386 12 16960409 16962122 Lal12g1386 12 16960409 16962122 ECH
Lal12g1386 12 16960409 16962122 Lal13g1693 13 16601643 16605186 LSH
Lal12g1386 12 16960409 16962122 Lal24g1278 24 14081678 14084713 LSH