Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g1380 ATGGCTGCAACCATTGCTAAGAAGAAGGTTGTGTTCATAATGGGCTCAACTGGCACTGGAAAAACCAAACTTTCAATCAACCTTGGCACCAAATTTGAATCTGAGATCATAAATTCTGACAAAATTCAAGTATACAAGGGCCTTGACATAGTAGTGAACAAGATTCCTGAATCTGAACGTTGTGGCATTCCTCATCACTTGCTAGATATCATTGATGATTATGACTACACTTTCACTTCTGAAGATTTCTGCAACCATGCACTTTCTGCTATAGATCTTATTCATCAAAATGGACACTTACCCATTATTGTAGGAGGATCAAATAATTACCTACAAGCCTTAGTAGAGAACCCTAACAATGCATTTCGTTCCAAATATGATTGTTGCTTTATCTGGCTTCATGTGTCTTTACCTATTTTGTTTCAATATTTAGACAAAAGGGTTGATGAAATGGTAGATGCAGGGTTTGTGGATGAGATTCGAGAAGCTTATGTTCCTGGTGCAAGTTACTCTAATGGTTTAAGAAGAGCCATTGGTGTTGCTGAGTTTGATGAATATATGAAGGTAGAGAAAGAATCATATGATGAGGTTTATAAGGAAAAGATGCTACAAGATGCAATTAGGAGAACAAAAGAAAATACTTTTAAGTTGGCTGAAGTTCAATTTCAGAAGATTCATAGGCTTAATTATGAGCTTGGATGGGGAATGAACATCATTGATTCTACACAAGTGTTTGAAGCTATTTTAAGAGGAGAAAAGTATATGGATTTGTACAAGGAGATTATATTCAAACCAAGCATGAATATAGTGCAAAAGTTTGTAGAGGAACCAAACCAAGAAACACCATAA 849 0.3569 MAATIAKKKVVFIMGSTGTGKTKLSINLGTKFESEIINSDKIQVYKGLDIVVNKIPESERCGIPHHLLDIIDDYDYTFTSEDFCNHALSAIDLIHQNGHLPIIVGGSNNYLQALVENPNNAFRSKYDCCFIWLHVSLPILFQYLDKRVDEMVDAGFVDEIREAYVPGASYSNGLRRAIGVAEFDEYMKVEKESYDEVYKEKMLQDAIRRTKENTFKLAEVQFQKIHRLNYELGWGMNIIDSTQVFEAILRGEKYMDLYKEIIFKPSMNIVQKFVEEPNQETP 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g1380 282 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 137 236 - -
Lal12g1380 282 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 5 279 - -
Lal12g1380 282 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 5 279 IPR039657 -
Lal12g1380 282 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 166 IPR027417 -
Lal12g1380 282 Gene3D - 7 274 IPR027417 -
Lal12g1380 282 Pfam IPP transferase 43 118 - -
Lal12g1380 282 Pfam IPP transferase 122 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g1380 Lal-Chr12 16912555 16913403 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g1380 90 275 C2H2 Transcription Factor Family AT2G27760 31.982 1.76e-22 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g1380 K10760 - gmx:121173984 417.927