Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g1355 ATGCCAAGCGTGGCCGTTAAACTTTACAGTGTATTCTTCAAGTTCCTGTTAAAGCAACGTTTACAAAATCGGATCCAATCCAATCCCCAACAACCCGACCCGTTTGGTATCACTTCTCGACCCGATGAATCCGTCGCTAATTCTAACCCTTCTTTCTCTGATGGCGTCGCTACCAAAGATATTCACATCGATCCTTTCACTTCTCTTTCTATTCGTATCTTTCTCCCTGATTCCGCTCTTTCCAAACCTAACCCGAACCTGGGTAGGGTTGGAAATTCTGATTCCAAACCTAACCCGAACCTGGGTCGGATTGGAAATTCTGATTCCAAACCTAAATCGAACCTGGGTCGGAATGGGGATTCTGATTTGAATGTTTTGCGGAGGAAAAGTTATGGTTTTTCTGGTGATGGGGTGGAATTGAATGGGGAAGAGGAATCTTCTAGAAGGAGTAGTTTTGGTGAGGGTTTGAGTAGTTATAAGGGTTATTCTCCGGCGTTGGATAATCGTCGGAAAAAGCTTCCGGTGATGTTGCAGTTTCATGGTGGGGGTTGGGTGAGTGGGAGTAACGATACGGTGGCGAATGATTTCTTTTGTAGGAGAATTGCGAGGTTGTGTGATGTTATTGTTGTCGCGGTTGGGTATAGGCTGGCGCCTGAGAATCGGTATCCGGCCGCATTTGAGGATGGGATGAAGGTTTTGAGTTGGTTGGCCAAGCAGGCGAATTTAGCTGAGTGTAGTAAGTCAATGGGGGTTAAGAAATTGGATGCTCATAATAGGCATATTGTTGATACATTTGGTGGTGCTTCAATGGTGGAACCATGGTTGGCTGCTCATGGAAATCTGTCAAGATGTGTTCTTCTTGGTGTGAGTTGTGGTGCAAATATTGCAGACTATGTGGCTCGAAAAGCAGTAGAAGCAGGCAAACTTCTGGACCCTGTAAAGGTGGTGGCACAGGTCCTCATGTATCCATTTTTTGTTGGAAGTGTGCCCACTCGGTCTGAAATAAAGTTGGCGAACTCTTATTTTTACGACAAGGCTATGTGTATGCTCGCGTGGAAACTTTTCCTACCCGAAGAAGAATTTAGCCTGGACCATCCAGCCGCCAATCCCCTAGTCCCAGGCCGGGGTCCTCCATTAAAGTTGATGCCTCCAACAATGACAGTGGTGGCCGAACATGACTGGATGAGGGACCGTGCCATCGCTTACTCAGAGGAACTCAGGAAGGTGAATGTTGATGCACCCGTTCTTGAATACAAGGACGCGGTTCATGAATTTGCAACACTTGACATTCTTCTGAAAACCCCTCAGGCTCAGGTTTGTGCTGAGGACATTGCCATCTGGGTCAAGAAATATATTTCACTTCGAGGTCACGAATTCTCGTATTGA 1386 0.4639 MPSVAVKLYSVFFKFLLKQRLQNRIQSNPQQPDPFGITSRPDESVANSNPSFSDGVATKDIHIDPFTSLSIRIFLPDSALSKPNPNLGRVGNSDSKPNPNLGRIGNSDSKPKSNLGRNGDSDLNVLRRKSYGFSGDGVELNGEEESSRRSSFGEGLSSYKGYSPALDNRRKKLPVMLQFHGGGWVSGSNDTVANDFFCRRIARLCDVIVVAVGYRLAPENRYPAAFEDGMKVLSWLAKQANLAECSKSMGVKKLDAHNRHIVDTFGGASMVEPWLAAHGNLSRCVLLGVSCGANIADYVARKAVEAGKLLDPVKVVAQVLMYPFFVGSVPTRSEIKLANSYFYDKAMCMLAWKLFLPEEEFSLDHPAANPLVPGRGPPLKLMPPTMTVVAEHDWMRDRAIAYSEELRKVNVDAPVLEYKDAVHEFATLDILLKTPQAQVCAEDIAIWVKKYISLRGHEFSY 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g1355 461 Pfam alpha/beta hydrolase fold 176 426 IPR013094 GO:0016787
Lal12g1355 461 MobiDBLite consensus disorder prediction 24 55 - -
Lal12g1355 461 PANTHER ARYLACETAMIDE DEACETYLASE 22 441 - -
Lal12g1355 461 MobiDBLite consensus disorder prediction 85 120 - -
Lal12g1355 461 MobiDBLite consensus disorder prediction 24 57 - -
Lal12g1355 461 SUPERFAMILY alpha/beta-Hydrolases 50 452 IPR029058 -
Lal12g1355 461 PANTHER CARBOXYLESTERASE 16-RELATED 22 441 - -
Lal12g1355 461 MobiDBLite consensus disorder prediction 136 156 - -
Lal12g1355 461 MobiDBLite consensus disorder prediction 82 123 - -
Lal12g1355 461 Gene3D alpha/beta hydrolase 35 456 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g1355 Lal-Chr12 16663339 16668154 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g1355 1 461 Carbohydrate Esterase AT3G27320 69.409 0.0 639
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g1355 - - adu:107494848 684.871
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g1355 12 16663339 16668154 Lal12g1355 12 16663339 16668154 ECH
Lal12g1355 12 16663339 16668154 Lal13g1676 13 16499003 16505195 LSH