Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g1336 ATGGCTGCTTTAGTAGATAAAACTGTGTTATCGTGGTTTATGTTAGTAACAATATTTGTTACATTTCAAATGATGAATGGTGTGGAATCTGGTTTTTTTCCAAAAGCACAAGTTGGAATTATAAACACTCTTCCGGTGCAATTGGACTTCCATTGTAAGGATAAAACTCGTGATGATGGGTTTCATACTTTGCCTCCTGGTCAAACTTACCACTTCGAGTTTAAGATTGAATTCCTTTTTAAGCGTACACAATGGTTTTGCCAATTTAATTGGTACCGAAAAAGACAAGAAAGTCACTACTTTGATATTTATGTTCAAACTAGAGATAACTCCTCCAATGCTGATTGGAAAATTACGACGACGGGGGCATGTAAGATAGTCAATCCAACCACAGGTAATATCTTTTGTTATCCATGGAATGAACTTCAAGGGAGAAAGAAGCTTCTCATTTCTAACACTACTACTGAACAAGAATCACCTCTTTCTTGA 489 0.3599 MAALVDKTVLSWFMLVTIFVTFQMMNGVESGFFPKAQVGIINTLPVQLDFHCKDKTRDDGFHTLPPGQTYHFEFKIEFLFKRTQWFCQFNWYRKRQESHYFDIYVQTRDNSSNADWKITTTGACKIVNPTTGNIFCYPWNELQGRKKLLISNTTTEQESPLS 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g1336 162 Pfam Plant self-incompatibility protein S1 38 139 IPR010264 -
Lal12g1336 162 PANTHER S-PROTEIN HOMOLOG 18-RELATED 17 139 - -
Lal12g1336 162 PANTHER - 17 139 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g1336 Lal-Chr12 16432022 16432510 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g1336 14 141 Carbohydrate Esterase AT3G16970 32.624 1.05e-13 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g1336 - - lang:109347126 186.037