Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g1317 ATGGATTTGACATCAGAGAAGAAGGAATTAAAGATCAACAACAACATTTCTGACAATACCATTCATCAATTGTCACTTGATGCTGCTAACAAAGAAGCTGAAGAGCGACAAGCTCGTGATCTCAAAGCTGGTCTTCACCCTCTTAAGCACAAGTTTGTACTTTGGTACACACGGCGCACACCTGGAGTACGAAGTCAAGCATCATATGAGGACAACATAAAGAAAATTGTTGATTTCAGTACGGTTGAAGGATTTTGGGTCTGCTATTGCCATCTTGCTCGTCCTTCTTCTTTGCCTAGTCCAACAGATTTGCACCTATTTAAGGATGGAATCCGTCCTTTATGGGAGGATTCTGCTAACTGCAATGGTGGTAAATGGATTATACGATTCAAAAAGGTCGTCTCAGGTCGTTTCTGGGAAGACTTGGTTCTTGCCTTAGTGGGTGACCAATTGGATTATGGAGATAACATTTGCGGTGCAGTACTAAGCATTCGTTTCAGTGAGGATATATTGAGTGTCTGGAACCGTAATGCATCTGATCATCAGGCTGTAATGGGTCTGAGAGATTCGATTAAACGTCACTTGAAACTTCCTCATAGCTATGTGATGGAGTACAAGCCCCATGACGCCTCTCTGCGAGACAAGTCATCTTACAGGAACACTTGGCTGAGAGGCTAA 678 0.4292 MDLTSEKKELKINNNISDNTIHQLSLDAANKEAEERQARDLKAGLHPLKHKFVLWYTRRTPGVRSQASYEDNIKKIVDFSTVEGFWVCYCHLARPSSLPSPTDLHLFKDGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDYGDNICGAVLSIRFSEDILSVWNRNASDHQAVMGLRDSIKRHLKLPHSYVMEYKPHDASLRDKSSYRNTWLRG 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g1317 225 ProSitePatterns Eukaryotic initiation factor 4E signature. 103 126 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Lal12g1317 225 Pfam Eukaryotic initiation factor 4E 47 205 IPR001040 GO:0003723|GO:0003743|GO:0006413
Lal12g1317 225 PANTHER BNAA10G16710D PROTEIN 31 225 - -
Lal12g1317 225 Gene3D RNA Cap, Translation Initiation Factor Eif4e 21 218 IPR023398 -
Lal12g1317 225 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 31 225 IPR001040 GO:0003723|GO:0003743|GO:0006413
Lal12g1317 225 SUPERFAMILY eIF4e-like 39 221 IPR023398 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g1317 Lal-Chr12 16133256 16137737 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g1317 33 225 Eukaryotic Initiation Factors Gene Family AT5G18110 84.974 2.19e-125 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g1317 K03259 - gmx:100499744 410.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g1317 12 16133256 16137737 Lal12g1317 12 16133256 16137737 ECH
Lal12g1317 12 16133256 16137737 Lal13g1596 13 15803698 15807593 LSH