Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g1289 ATGGGTAGTAGCACAAGAAAAGTGAAGATTAACACTGAGGAAGCTAACAAATTTGTGAAAGGGATGCCAAGTTATGCTCCTTCATTGCCTTCTTCTAGTTCCATGTGCGTAGAAGGAACTACTGTTCCTCCATCTCGAGTTTCCGAATTTGGACACCTTGAGCAATCTATCGGATTTCGTTTGGAGGATGCTATCAATCTTAGCAGAAATCCAGTGTTCAATCAAATGAAGTCACATAGCCAAGTTCCTGGTTCTGATGTTCAGTTTGGTGCTTTGGGCAAGATACAGTCTGTTGCAGCCTCAGATGTGAACCTCTTTGCCACAATTGCTGGGTCTCAGACATTGCCGGTTCAAAAAGCGTTGCCACCAAATTTAGCTTACACATCGGCTGGTCATCGTGAGAACTGGGGGGAGTCCGGAATGGCAGTGGCAAGCCCTATGACTGGTTCGTCAACAGATGATACTGACGATAAAAATCAATGGTCTAAAAGGGATCAATTAGCTATTGCATCTGCTGATTCCAGTGATAGATCAAAAGATAAATCAAATCAAAAGTTATTACGACGCCTAGCTCAAAATCGGGAGGCTGCCAGGAAAAGCAGACTGAAGAAAAAGGCATATGTTCAACAATTAGAGAGTAGCAGACTGAAACTGGCCCAACTTGAGCAAGAGCTCCAGAAAACCCGCCAGCAGGGCTCATTTATTTCAAGCACAGGAGATCAGGGTCATTCAATGAGTGGAAATGGTGCTATGCAGTTTGATGCAGCATATGCACGATGGTTAGAAGAGCATAATCGGAAAATCAATGAGCTTATGGCTGCAGTAAATTCTCATGCTGGAGATATTGAACTTCGTACTATTGTAGACAATGTCATGACACAATTTGATGAGATCTTCAAGCTGAAAGGTATTGCAGCTAAATCTGACGTTTTCCACATTCTGTCGGGAATGTGGAAGACACCGGCTGAGAGGTGTTTCATATGGATTGGAGACTTTCGCGCATCCGAGCTTCTCAAGCTGCTTGCAAATCATCTAGAGCCTTTGAGTGAGCAACAATTAATCGGCATCTACAACTTGCAGCAGTCTTCTCAGGAAGCCGAAGATGCGTTGTCCCAAGGAATGGATGCATTGCAGCAATCACTGGCTGAGACATTGGCTAATGGTGCTCCTAGCCCTTCAGGGTCTTCAGGAAATGTGGCAAATTATATGGGGCAAATGGCTATGGCCATGGGAAAGCTTGGTACTCTTGAGGGGTTTCTTCACCAGGCTGATAATCTGCGGCAGCAAACCTTACAACAAATGCTTCGGATATTAACAACCCGGCAATCGGCTCGAGCTCTTCTTGCAATAAGTGACTATTTTTCTCGGCTGCGGGCCCTAAGCTCGCTGTGGCTTGCCCGGCCAATGGAGTAA 1413 0.4522 MGSSTRKVKINTEEANKFVKGMPSYAPSLPSSSSMCVEGTTVPPSRVSEFGHLEQSIGFRLEDAINLSRNPVFNQMKSHSQVPGSDVQFGALGKIQSVAASDVNLFATIAGSQTLPVQKALPPNLAYTSAGHRENWGESGMAVASPMTGSSTDDTDDKNQWSKRDQLAIASADSSDRSKDKSNQKLLRRLAQNREAARKSRLKKKAYVQQLESSRLKLAQLEQELQKTRQQGSFISSTGDQGHSMSGNGAMQFDAAYARWLEEHNRKINELMAAVNSHAGDIELRTIVDNVMTQFDEIFKLKGIAAKSDVFHILSGMWKTPAERCFIWIGDFRASELLKLLANHLEPLSEQQLIGIYNLQQSSQEAEDALSQGMDALQQSLAETLANGAPSPSGSSGNVANYMGQMAMAMGKLGTLEGFLHQADNLRQQTLQQMLRILTTRQSARALLAISDYFSRLRALSSLWLARPME 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g1289 470 MobiDBLite consensus disorder prediction 140 161 - -
Lal12g1289 470 SMART brlzneu 181 244 IPR004827 GO:0003700|GO:0006355
Lal12g1289 470 Gene3D - 184 237 - -
Lal12g1289 470 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 188 203 IPR004827 GO:0003700|GO:0006355
Lal12g1289 470 Pfam bZIP transcription factor 184 227 IPR004827 GO:0003700|GO:0006355
Lal12g1289 470 PANTHER TRANSCRIPTION FACTOR TGA2.3-LIKE ISOFORM X1 60 470 - -
Lal12g1289 470 CDD bZIP_HBP1b-like 185 237 - -
Lal12g1289 470 ProSiteProfiles DOG1 domain profile. 250 467 IPR025422 GO:0006351|GO:0043565
Lal12g1289 470 Pfam Seed dormancy control 268 342 IPR025422 GO:0006351|GO:0043565
Lal12g1289 470 PANTHER TRANSCRIPTION FACTOR TGA9 60 470 - -
Lal12g1289 470 Coils Coil 261 281 - -
Lal12g1289 470 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 183 227 IPR004827 GO:0003700|GO:0006355
Lal12g1289 470 SUPERFAMILY Leucine zipper domain 185 229 IPR046347 GO:0003700|GO:0006355
Lal12g1289 470 Coils Coil 204 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g1289 Lal-Chr12 15848430 15856184 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g1289 141 470 bZIP Transcription Factor Family AT3G12250 71.299 6.12e-165 466
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lal12g1289 DOG1 8.2e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g1289 K14431 - gmx:778136 672.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g1289 12 15848430 15856184 Lal12g1289 12 15848430 15856184 ECH