Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g1270 ATGGCAAAACAGAAGAACTGGTTTAGATGGGTGAAGAAGTTATTCATTTCTGAGTCAAATGACAAAAAATGGAGATGGAGTCTTGGAAGGCTTAAGCAGAAACCACATTCCACTATTACAGGACCAAACAGGACATTAATTGAAGCAAGTGCTGAGCAAAGAAAGCATGCATTGACTGTGGCAATTGCAACAGCAGCTGCTGCAGAGGCTGCAATTGCTGCTGCTCATGCTGCAGCCGAGGTTGTGAAACTCACGGGTGCTTCTCATTCTTCTTATTCATATCTGCGCAACGGAGATCGAAGTTTTGCAGCCATCAAGATTCAGAGCGCTTATCGCGCGCATCTTGCTAGGAAAGCATTAAGAGCATTGAAGGGTGTTATAAGGCTGCAAGCTATTATTCGCGGTCAAATTGTGAGGCGTCAAGTGTCGGGCTCTTCGAACAATTTTCCCTCAAATGCAAGAAATCGGGTTGACATCCAGGAAAGAAGCAGTCATACAGATGAGGAGAGGTACAAAATCGACCCGGTCAAGCAGTTTCCGGAGCAATATAAGTTAGAAGAGAAAGAACTAGAGCATGGAAACTATAGTCAAAGAACTTGGAATTGCAGCTTGCACTCAAGAGAAGAAATTGAATCCATATGGTTGAGAAAGCAAGAAGCCTTTCTCACAAGAGAGCGTATGAAGCAGTACTCTTTTTCACAAAGGGAGAGACAAAGTCCCCAAGTAATGAAAGAATCTATGCACAACAAGGAATTTGTAAGAGAGAGCTACCCTACTCTAGGACAGTGGCTACTTAAAGAACCATGTGATAGGGATGTGCCTTATAAACAAGCTTCTCCTTTAGACTTGATTACAATGAAAAAAGAGTTGCAAGAAGAAGGAATAAGTCCACAAATTTCAATCTCAAGGAAATCATTTTCTCATATAAAAAGTTCAGTTCGAGACGATATTTCGGCGCCAAATTCTCCCGTTTTTCCTACATTCATGGCTGTGACAAAATCCAGCAAAGCAAAGGCAAGGTCTATGAGCACACCAAGGCAAAGAACAGGTTTTTTGGGTGTACACTCCAATCAGAATGATGGCATTTATTTGTGCTCTTCTTATTATGATGCAACTAGCACTTCTAATGAAAACAGAGAAGTTTCTCCCAAGAGTGCAAAAAAACCAGTGCTGTCATTAGAAGATGTAAAATCTGGTTCAATGCATGAATTATAG 1215 0.4132 MAKQKNWFRWVKKLFISESNDKKWRWSLGRLKQKPHSTITGPNRTLIEASAEQRKHALTVAIATAAAAEAAIAAAHAAAEVVKLTGASHSSYSYLRNGDRSFAAIKIQSAYRAHLARKALRALKGVIRLQAIIRGQIVRRQVSGSSNNFPSNARNRVDIQERSSHTDEERYKIDPVKQFPEQYKLEEKELEHGNYSQRTWNCSLHSREEIESIWLRKQEAFLTRERMKQYSFSQRERQSPQVMKESMHNKEFVRESYPTLGQWLLKEPCDRDVPYKQASPLDLITMKKELQEEGISPQISISRKSFSHIKSSVRDDISAPNSPVFPTFMAVTKSSKAKARSMSTPRQRTGFLGVHSNQNDGIYLCSSYYDATSTSNENREVSPKSAKKPVLSLEDVKSGSMHEL 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g1270 404 ProSiteProfiles IQ motif profile. 124 151 IPR000048 GO:0005515
Lal12g1270 404 ProSiteProfiles IQ motif profile. 100 128 IPR000048 GO:0005515
Lal12g1270 404 Pfam Protein of unknown function (DUF4005) 311 360 IPR025064 -
Lal12g1270 404 Gene3D - 100 145 - -
Lal12g1270 404 PANTHER IQ-DOMAIN 12 1 377 - -
Lal12g1270 404 PANTHER IQ-DOMAIN 5-RELATED 1 377 - -
Lal12g1270 404 SMART iq_5 122 143 IPR000048 GO:0005515
Lal12g1270 404 SMART iq_5 99 121 IPR000048 GO:0005515
Lal12g1270 404 MobiDBLite consensus disorder prediction 374 404 - -
Lal12g1270 404 Pfam IQ calmodulin-binding motif 103 121 IPR000048 GO:0005515
Lal12g1270 404 Pfam IQ calmodulin-binding motif 124 141 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g1270 Lal-Chr12 15543165 15547220 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g1270 1 382 IQD Protein Family AT5G03960 38.025 1.47e-59 197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g1270 12 15543165 15547220 Lal12g1270 12 15543165 15547220 ECH