Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g1254 ATGGAAAACTACTTTGGAACTACACACAAAGAGGATTTCGTGCAATTCCATAGAGACAGTTGCATCGATTCTAATAAAATGCCAATCCTACCGTTTCTCCGCTTAGCTTCCCACTTCACAAAACCAAATCGTTCAAACACATTTAACCTCTTCCCATTACTCTCCTTTTCCACCACCACCGCCGCCGCATCAGAACACCATCACTCTCCGCCTCCCATCCGCGTCGCCCTCACCCACTCCTCCGGCCGCGGCGTCTTTGCCACTCGCCCTATCGCCACTGGAGATCTAATCCACACCGCTAAGCCAGCTCTGTGCCACCCTTCTCTCTCCGCCATCGATACTGTATGTTACTCCTGCCTCAGGAAGGTTCCGATTTCTTCCAAATTTCAATATCAAGGGGTTTCGTTTTGCAGCCAAGATTGCAAACGACGCTGCAATGAATTTTACGATGTTGAGATGAAAGCAAATTGGATGGCTTTTGATGACTATTGCAGGACCCATGGTTTGAAATATCCATTTCTGGTAAAGCGGTTGGCTTGCATGGTCATATCAGGAGTTAGCAAAAGTGACAGTCTTGACATACTTCAGCCTGCCAATTTGACATCTGATATGATTTTAGAGATGGAGGAGGAGTTTGCGTTGCTAAAGAATGCCTTCCGAGAGACATCTATTGCAGATGAACATATTGCTTTTTTAACCAAGCAATGGTACATCAGCGTTTTGGTGCGAATTCGAATCAATGCATTTCGCATTGAGTTGGTCGGAGGACTATATGAAGATCTTCTCTCATCAGCAGTTGCATCTGTAGAAGCTGAAGCTGCTGTTGGAAATGCTGTTTATATACTTCCGTCTCTCTACAATCATGATTGTGATCCTAATGCACACATTATTTGGATAGATAATGCTGATGCCAAAATAAAGGCCCTCCGTGACATCGATGAAGGTGAAGAACTCAGAATCTGCTATATTGATGCCAGCATGGACCGCGATGCTCGGCAAGAAATATTGTTTCAAGGTTTTGGTTTTCAGTGCAATTGTAGTAGGTGCTTACAAGGTGATTAA 1062 0.4454 MENYFGTTHKEDFVQFHRDSCIDSNKMPILPFLRLASHFTKPNRSNTFNLFPLLSFSTTTAAASEHHHSPPPIRVALTHSSGRGVFATRPIATGDLIHTAKPALCHPSLSAIDTVCYSCLRKVPISSKFQYQGVSFCSQDCKRRCNEFYDVEMKANWMAFDDYCRTHGLKYPFLVKRLACMVISGVSKSDSLDILQPANLTSDMILEMEEEFALLKNAFRETSIADEHIAFLTKQWYISVLVRIRINAFRIELVGGLYEDLLSSAVASVEAEAAVGNAVYILPSLYNHDCDPNAHIIWIDNADAKIKALRDIDEGEELRICYIDASMDRDARQEILFQGFGFQCNCSRCLQGD 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g1254 353 Gene3D - 167 248 - -
Lal12g1254 353 CDD SET_SMYD 276 349 - -
Lal12g1254 353 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SMYD 77 350 - -
Lal12g1254 353 Gene3D SET domain 84 349 IPR046341 -
Lal12g1254 353 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SMYD3 77 350 - -
Lal12g1254 353 Gene3D - 115 166 - -
Lal12g1254 353 Pfam SET domain 82 322 IPR001214 GO:0005515
Lal12g1254 353 ProSiteProfiles SET domain profile. 71 323 IPR001214 GO:0005515
Lal12g1254 353 SUPERFAMILY SET domain 68 349 IPR046341 -
Lal12g1254 353 SMART set_7 71 329 IPR001214 GO:0005515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lal12g1254 SET 3.2e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g1254 - - lja:Lj0g3v0252639.2 470.7