Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g1238 ATGGAAATGCCTGGTAGAAGATCCAACTATTCCCCCTTAAGTCAAATTTCTGACGACCAGTTCAGCGCCGGCGCCGCTTCTTCCGGGAATACAGCACCGTCATCTTCCGGCGACGGGAAAACCAACCGATCCAAGTTCGATTGGGACATAGTCGCTGATCATAGAGTAGCTCAGCAGCAAGCGAACAATCGGATCGGAAATTTGTTCGCTTCGACCGGATTGCAGAGGCAATCAAGTGGAAGTAGTTTCGGCGAAAGCTCAATCTCCGGAGGCGCTGACTATAACGCTCAGACGTTGTTCACGGCGGCGGTTAGCGACGTGGATACATTTGGTTACGGTCACGATGATGGATTTAGGATTGACGTTGGTGGTGAGTCGAGGAATAGGTTACCGGAGACTCCGGCCGTTGTAGGAGGGTCCTCCGGGAAGAGCTGGGCGCAGCAGACGGAGGAGAGTTACCAGTTGCAGCTAGCCCTGGCGCTTCGGCTTTCGTTAGATGCGACTTGTGCTGATGATCCCAATTTTCTTGATTCAGGGCCGGATGAAACCGCTTTGAGGTCTTCAAGTTCGGCGGAGATGGTGTCGCATAGATTCTGGGTGCATGGCTGCCTATCATACTCCGACAAAATTCCTGATGGTTTTTACCTAATTCATGGGATAGATTCCTTTGTTTGGACTGTGTGCACTGATTTGCAGGAAAATGGCCGAATTCCAACTATTGATAAACTAAAGTCTGTGGATCCCTGTAACAATTCTTCACTTGAAGTAGTATTGGTAGACAGACGCAGTGACCCCAGCTTAAGAGAACTTCAAAACAGAGTACATAACATTTCTAGTAGCAGCATAACAACAACAGAGGTTGTAGATCAGCTGTCCAAGCTGGTTTGCAACCATATGGGGGGTTCAGCTTCTGTTGGGGAAGATGACTTTGTTTCCAGCTGGAGAGATTGCAGTAATGATCTGAAAGATTGCTTAGGATCTGTTGTTGTTCCCATAGGCAGTCTGTCTGTTGGCCTCTGCAGGCATCGTGCTATTTTATTCAAAGTACTAGCTGATGCCATTGATTTACCATGTCGAATTGCAAAGGGTTGTAAATATTGCAAAAGTGATGATGCTGCATCTTGTCTTGTCTGGTTTGGACATGTCAATGACAGGGAATATCTTGTTGATTTACTTGAGAAACCAGGTTACTTATGTGAGCCTGATTCATTGCTGAATGGTCCATCTTCCATCTCATTTTCTTCACCCTTGCGCTTTCCAAGAGTTAAACCAGCTGAACCTACCATTGATTTCAGGTTACTGGCCAAACAGTATTTCTCGGACTGTTTGTCTCTTGAGCTTGTCTTTGATAACAGTTCTGCAGGGGCTGTTACTGGTGGAGATTCTGGTTTCCCCATTCCGGATCAGTTTGAGGGGAAGTACAAGGACAGGAATCATGCCAGGCAATTAACAAATGACAGCAACAGAAGTTCTTACCTGCCTTTACATCAACAAGTTTCTCATTCAAACACACATAATCAAGATTTTGAGACAACTTTTGCCAAGGATCCACCGCTTATAAAGCATAAGCATCCTCCTATTGGTATAATAACCCCATTAGCACTAACAAATCCCAATAATCATATTACTGAAGAAAGGTTATTTTTTGAAGGAGGCCAACTTAATCCTAGCAAACCTACTCGAGAGATTGCCCTTGACATGGAAGATTTGGATATATCATGGAGTGATCTTGCTTTAAAAGAAAGAATAGGATCAGGTTCTTTTGGAATTGTACATCGTGCTGAGTGGAATGACTCGGAGGTTGCTGTTAAAATTTTGATGGAACAAGATTTTCATGCTGAACGCGTCGATGAATTCCTTAGGGAGGTTGCAATAATGAAACGCTTGCGGCATCCAAACATAGTTTTATTGATGGGTGCAGTCACTCAGCCTCCAAATTTATCAATTGTCACAGAATATTTATCAAGGGGTAGCTTATACAGGCTGTTGCATAGACCTGGTGCCAAAGAGTCATTGGATGAGAGGCGGAGGCTTTGTATGGCTTATGATGTGGCAAAGGGGATGAATTATCTTCATAAACGTAATCCGCCCATTGTTCATAGAGATCTGAAATCTCCAAACCTTCTTGTTGACAAGAAATATACAGTGAAGGTTGGTGATTTTGGGCTTTCCCGTCTAAAGGCCAATACATTTCTCTCATCCAAGTCAGCTGCTGGGACTCCTGAGTGGATGGCTCCAGAAGTTCTCCGTGATGAGCCATCAAATGAGAAGTCAGATGTTTACAGTTTTGGTGTAATCTTGTGGGAGCTTGCAACATTGCAACAGCCATGGGGCAATTTGAATCCAGCACAGGTTGTGGCAGCTGTTGGCTTTAAGGAAAAAAGGCTTGAGATCCCACGCGATTTGAATCCGCATATAGCTGCATTAATTGAAATTTGCTGGGCCAATGAGCCATGGAAACGCCCTTCTTTTTCTAGTATTATGGATTCTTTGAGGCCATTGATCAAATCCCCTACGCCTCAACCTGGTCATTCAAACATGCCATTACTTAGCTGA 2556 0.4456 MEMPGRRSNYSPLSQISDDQFSAGAASSGNTAPSSSGDGKTNRSKFDWDIVADHRVAQQQANNRIGNLFASTGLQRQSSGSSFGESSISGGADYNAQTLFTAAVSDVDTFGYGHDDGFRIDVGGESRNRLPETPAVVGGSSGKSWAQQTEESYQLQLALALRLSLDATCADDPNFLDSGPDETALRSSSSAEMVSHRFWVHGCLSYSDKIPDGFYLIHGIDSFVWTVCTDLQENGRIPTIDKLKSVDPCNNSSLEVVLVDRRSDPSLRELQNRVHNISSSSITTTEVVDQLSKLVCNHMGGSASVGEDDFVSSWRDCSNDLKDCLGSVVVPIGSLSVGLCRHRAILFKVLADAIDLPCRIAKGCKYCKSDDAASCLVWFGHVNDREYLVDLLEKPGYLCEPDSLLNGPSSISFSSPLRFPRVKPAEPTIDFRLLAKQYFSDCLSLELVFDNSSAGAVTGGDSGFPIPDQFEGKYKDRNHARQLTNDSNRSSYLPLHQQVSHSNTHNQDFETTFAKDPPLIKHKHPPIGIITPLALTNPNNHITEERLFFEGGQLNPSKPTREIALDMEDLDISWSDLALKERIGSGSFGIVHRAEWNDSEVAVKILMEQDFHAERVDEFLREVAIMKRLRHPNIVLLMGAVTQPPNLSIVTEYLSRGSLYRLLHRPGAKESLDERRRLCMAYDVAKGMNYLHKRNPPIVHRDLKSPNLLVDKKYTVKVGDFGLSRLKANTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKEKRLEIPRDLNPHIAALIEICWANEPWKRPSFSSIMDSLRPLIKSPTPQPGHSNMPLLS 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g1238 851 MobiDBLite consensus disorder prediction 8 41 - -
Lal12g1238 851 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 133 844 - -
Lal12g1238 851 Pfam Ethylene-responsive protein kinase Le-CTR1 191 399 - -
Lal12g1238 851 SMART serkin_6 577 835 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal12g1238 851 ProSitePatterns Serine/Threonine protein kinases active-site signature. 698 710 IPR008271 GO:0004672|GO:0006468
Lal12g1238 851 Gene3D Transferase(Phosphotransferase) domain 1 656 844 - -
Lal12g1238 851 ProSiteProfiles Protein kinase domain profile. 577 835 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal12g1238 851 Pfam Protein tyrosine and serine/threonine kinase 578 831 IPR001245 GO:0004672|GO:0006468
Lal12g1238 851 CDD STKc_MAP3K-like 583 831 - -
Lal12g1238 851 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 133 844 - -
Lal12g1238 851 Gene3D Phosphorylase Kinase; domain 1 570 655 - -
Lal12g1238 851 MobiDBLite consensus disorder prediction 1 43 - -
Lal12g1238 851 PRINTS Tyrosine kinase catalytic domain signature 651 664 IPR001245 GO:0004672|GO:0006468
Lal12g1238 851 PRINTS Tyrosine kinase catalytic domain signature 692 710 IPR001245 GO:0004672|GO:0006468
Lal12g1238 851 PRINTS Tyrosine kinase catalytic domain signature 739 749 IPR001245 GO:0004672|GO:0006468
Lal12g1238 851 PRINTS Tyrosine kinase catalytic domain signature 758 780 IPR001245 GO:0004672|GO:0006468
Lal12g1238 851 PRINTS Tyrosine kinase catalytic domain signature 802 824 IPR001245 GO:0004672|GO:0006468
Lal12g1238 851 ProSitePatterns Protein kinases ATP-binding region signature. 583 604 IPR017441 GO:0005524
Lal12g1238 851 SUPERFAMILY Protein kinase-like (PK-like) 559 830 IPR011009 -
Lal12g1238 851 MobiDBLite consensus disorder prediction 123 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g1238 Lal-Chr12 15013384 15041667 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g1238 1 847 MAP Kinase Kinase Kinase AT5G03730 63.448 0.0 962
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Lal12g1238 PK_Tyr_Ser-Thr 1.3e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g1238 K14510 - gmx:100800648 1248.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g1238 12 15013384 15041667 Lal12g1238 12 15013384 15041667 ECH