Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g1231 ATGGAACATCATCATCGTAATCATCGTCATCATTATCATTACCACCACGACCATCAACAACAACAACAGTATGGCATAACCGATCTCAGGCACCTCATGAATGGACAAAGCTCAACCCATTTCACTTCCATACCATTACCAACCCAACAACCCACGGCGGAGCTTTTTCCCGGTCACCGGAATCTGACACCTCACCACCACCAACACTACGAAATGATGATGTTTAATCATGAATTTGCCTCCACCGATTCTATTGCTCCAACAGGTATAACTGTAACAACTGCTGCAACCATGAGTGGAGATGCATACACTGGAAGATGGCCAAGACAAGAAACTTTAACTCTTCTTGAGATCAGATCTCGCCTTCACCCTAAATTCAAAGAGGCTAATCAAAAGGGACCCTTGTGGGATGAAGTTTCAAGAACAATGTACAATGAGTATGGATATCAAAGGAGTGGGAAAAAGTGTAGGGAGAAGTTTGAGAATCTTTACAAATATTACAAGAAAACAAAGGAAGGTAAAGCAGCAAGACAAGATGGGAAGCATTACAGATTCTTTCGCCAACTTGAAGCCTTATATGGAGAAAACATTAATCATTCCTCAATTCCAGAAACAAATTCTGGTAGCTACATGCATTTAAATACAATGAACACTACAGCTTTTCATGCAAATCTTGAAAATGTTAGCCTCAGTCTCACTAACTCCACTGACTTTGATACATCTTCATCTGAAAATGATGATGACAATGATCATAGTAACAGCATTGAGGGACTTATGGAGATGAACAATGAAGGAATGGATCAGAAGAGAGGGAATAAGAGGAAGAGTGGAAGGTGTTGGAAGGTGAAGATAAAAGACTTCATTGACTCACAGATGAGGAAGCTTATGGAAAAGCAAGATGAATGGTTGGATAAGCTTGTGAAGACAATGGAGCAGAAGGAAAAGGGTAGGGTTTTGAGAGAAGAAGAGTGGAGGAAACAAGAGGTGAATAGGTTAGAAAGGGAGCATAAGTTTTGGGCTAAAGAGAGGGCATGGATTGAAGCTAGGGATGCTACTTTAATGGATGCTTTGCAGAAACTAACAAGAAGACATATAAAGGTTAGTGAATCTCATGAGATAGAAACTGAGATTCAAAACAACAATGAAAACCATAATGAAGATGGATGTGAAATTATGAGTAGCACTATAAAAGTTGGTGATAAATGGAAAGAACTTGAGATTACAAAGCTGGAACAGTTGAGAGGTGAAATGGAAACATGGGAGGAAATTGCAAACAAAATGACTTGTTATGGATATCAAAGGACTGCATTGATGTGGAAAGAGAAATGGGAGAGTATGGAAGGAAACAAGAAGAGGAAGGAAAACCCTAGAAGTTGTTTTTACTTTGATAACAATGACAATTCTTCATTATACAATCAAGGAAGTACCCATTGTGATATCAATGATCAAAGACCTAAAAGTTCTTCACCTTCAAATTCCAATGTTGGTCATGCTGATAATGCATGCTTTCCCTTATTGATGAGTGAGGGAGGAAATCTATGGGAGAATTAG 1551 0.3894 MEHHHRNHRHHYHYHHDHQQQQQYGITDLRHLMNGQSSTHFTSIPLPTQQPTAELFPGHRNLTPHHHQHYEMMMFNHEFASTDSIAPTGITVTTAATMSGDAYTGRWPRQETLTLLEIRSRLHPKFKEANQKGPLWDEVSRTMYNEYGYQRSGKKCREKFENLYKYYKKTKEGKAARQDGKHYRFFRQLEALYGENINHSSIPETNSGSYMHLNTMNTTAFHANLENVSLSLTNSTDFDTSSSENDDDNDHSNSIEGLMEMNNEGMDQKRGNKRKSGRCWKVKIKDFIDSQMRKLMEKQDEWLDKLVKTMEQKEKGRVLREEEWRKQEVNRLEREHKFWAKERAWIEARDATLMDALQKLTRRHIKVSESHEIETEIQNNNENHNEDGCEIMSSTIKVGDKWKELEITKLEQLRGEMETWEEIANKMTCYGYQRTALMWKEKWESMEGNKKRKENPRSCFYFDNNDNSSLYNQGSTHCDINDQRPKSSSPSNSNVGHADNACFPLLMSEGGNLWEN 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g1231 516 MobiDBLite consensus disorder prediction 235 256 - -
Lal12g1231 516 CDD GT1 106 171 - -
Lal12g1231 516 Gene3D - 361 452 - -
Lal12g1231 516 Gene3D - 107 169 - -
Lal12g1231 516 MobiDBLite consensus disorder prediction 1 20 - -
Lal12g1231 516 MobiDBLite consensus disorder prediction 1 16 - -
Lal12g1231 516 Pfam Myb/SANT-like DNA-binding domain 106 192 IPR044822 -
Lal12g1231 516 ProSiteProfiles Myb-like domain profile. 99 164 IPR001005 -
Lal12g1231 516 MobiDBLite consensus disorder prediction 473 494 - -
Lal12g1231 516 PANTHER - 78 512 - -
Lal12g1231 516 PANTHER TRIHELIX TRANSCRIPTION FACTOR PTL 78 512 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g1231 Lal-Chr12 14938259 14942539 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g1231 17 515 Trihelix Transcription Factor Family AT5G03680 41.294 1.26e-114 349
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lal12g1231 Myb_DNA-bind_4 4.2e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g1231 - - lang:109335088 687.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g1231 12 14938259 14942539 Lal12g1231 12 14938259 14942539 ECH