Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g1222 ATGGCGGAAGAACATCGATTCCAATCTCCCGAAGGTCACAGACTCTGCGCCAATAACTGCGGATTCATCGGTAACCCAACCACCATGAATCTCTGTTCCAAATGCTACAGAGATATCCGTTTAAAGGAACAAGAAGAAGCTTCAACCAAATCCACAATCGAAACCGCTCTCTCCTCCTCTTCATCGCCGTTGTCCACGTCATCTCCGACCGTCGTTCTCATACCTACCGCATCGATCTCAACCGCAACAAAAGGCGTTGCTTCGTTCGGTTCGGTTTCTGCGGCGGTTCAACCGAACCGGTGCGGTTCGTGTAGGAAGCGGGTCGGGTTGACCGGGTTCAAGTGCAGATGTGGGACCACGTTCTGTGGGGCCCACAGGTATCCAGAGAAACACGAGTGCGGTTTCGATTTCAAGACGGTGGGGAGAGAGGAAATAGCGCGAGCTAACCCGGTGATAAAAGCGGCGAAGCTTGAGAGGATTTGA 483 0.5259 MAEEHRFQSPEGHRLCANNCGFIGNPTTMNLCSKCYRDIRLKEQEEASTKSTIETALSSSSSPLSTSSPTVVLIPTASISTATKGVASFGSVSAAVQPNRCGSCRKRVGLTGFKCRCGTTFCGAHRYPEKHECGFDFKTVGREEIARANPVIKAAKLERI 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g1222 160 ProSiteProfiles Zinc finger AN1-type profile. 95 141 IPR000058 GO:0008270
Lal12g1222 160 Gene3D - 1 68 - -
Lal12g1222 160 Pfam A20-like zinc finger 14 37 IPR002653 GO:0003677|GO:0008270
Lal12g1222 160 Gene3D - 77 156 IPR035896 -
Lal12g1222 160 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 15 62 - -
Lal12g1222 160 MobiDBLite consensus disorder prediction 50 66 - -
Lal12g1222 160 ProSiteProfiles Zinc finger A20-type profile. 10 44 IPR002653 GO:0003677|GO:0008270
Lal12g1222 160 MobiDBLite consensus disorder prediction 47 66 - -
Lal12g1222 160 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 3 1 160 - -
Lal12g1222 160 SMART AN1_Zf_4 101 138 IPR000058 GO:0008270
Lal12g1222 160 SUPERFAMILY AN1-like Zinc finger 94 154 IPR035896 -
Lal12g1222 160 Pfam AN1-like Zinc finger 101 137 IPR000058 GO:0008270
Lal12g1222 160 SMART A20_3 13 37 IPR002653 GO:0003677|GO:0008270
Lal12g1222 160 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g1222 Lal-Chr12 14811833 14812315 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g1222 1 160 C2H2 Transcription Factor Family AT3G52800 54.118 1.29e-51 160
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g1222 12 14811833 14812315 Lal12g1222 12 14811833 14812315 ECH