Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g1047 ATGGAAGAAGAAAAAGTGAACAACAATGTTTCTGAAGGATCACAGTCACAGCCAGTAACCACTCCATCAATTCCAGTGGCTATGATAGCACCAACCATGAACACTGGCAATCATAATGGAGTAACAACAACAACAGCAACAACAACAGCAGTAACAACAATGACAATACCATTGGATATCTCTGGTAAGAAGAAAAGAGGGAGGCCAAGAAAATATGACTCAGATGGGAAATTGAATGTGAAGTATCAAAGTGCAAAATCAGCACCAGCCTTTACTTTCTCTCCAACTTCACCAAACAGGGGTTCTGGAAGGTCCTTTGACTCCACCAACTGGCTACTATTTTCTCCTTCTTTTGGTGAGGTGTTTGCAAACTCAGCTGGTTGGGATTTTACACCATTTATGGTGACTGTTAATACTGGACAGGATGTTTCTGGAATGATCATGTCATTTGCCCAGAAGGGTCCAGGAGGAATATGCATTATGTCTGCTAATGGATCTGTCTCTAATGTTGCCCTACGACAACGGGATTCAGCGGGAGGCATTGGTAGATTTGAGATTTTATCTTTATGTGGATCCTTCATAGCCTCTGAAAATAGTGATATAAGAAGTCAAAGTGGTGGACTGAGTGTCTCACTATCTGCCCCTGATGGTAGTGTGATAGGAGGCCCTGTTGCTGGTCTATTAACTGCTGCTGGCCCCATCCAAATGGTAATTGGAAGCTTCATTCCAAATGGTTACACAACTCATAAAAGGAAACAACACCAGGAACATACAGTGGCATCTCCAATTTCATTTGGTCCAGCTACAGTGTCAGCAGCAGGACCTATCTCACAAGCAAATCCTACTAATGTTGATGCTGAAAATTCTCTGATGACTATGTCTCAGTTACCAGAACAAATCCAGAGTGAACCTGTCAGTGTTACAACAAGTGGTGATACACAGAATATAGATACCACACCTAATGCTGCTACATGGAATGGTTCTGATGAATTTTCAGGTCAGAGGGTATCCCCAGACATCAATTTATCTTTGCCAGATGAATAA 1044 0.4205 MEEEKVNNNVSEGSQSQPVTTPSIPVAMIAPTMNTGNHNGVTTTTATTTAVTTMTIPLDISGKKKRGRPRKYDSDGKLNVKYQSAKSAPAFTFSPTSPNRGSGRSFDSTNWLLFSPSFGEVFANSAGWDFTPFMVTVNTGQDVSGMIMSFAQKGPGGICIMSANGSVSNVALRQRDSAGGIGRFEILSLCGSFIASENSDIRSQSGGLSVSLSAPDGSVIGGPVAGLLTAAGPIQMVIGSFIPNGYTTHKRKQHQEHTVASPISFGPATVSAAGPISQANPTNVDAENSLMTMSQLPEQIQSEPVSVTTSGDTQNIDTTPNAATWNGSDEFSGQRVSPDINLSLPDE 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g1047 347 ProSiteProfiles PPC domain profile profile. 127 266 IPR005175 -
Lal12g1047 347 Pfam Plants and Prokaryotes Conserved (PCC) domain 132 241 IPR005175 -
Lal12g1047 347 MobiDBLite consensus disorder prediction 307 339 - -
Lal12g1047 347 SUPERFAMILY AF0104/ALDC/Ptd012-like 129 251 - -
Lal12g1047 347 PANTHER AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN 8 346 - -
Lal12g1047 347 MobiDBLite consensus disorder prediction 1 22 - -
Lal12g1047 347 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 8 346 IPR039605 GO:0003680
Lal12g1047 347 CDD DUF296 131 241 IPR005175 -
Lal12g1047 347 MobiDBLite consensus disorder prediction 8 22 - -
Lal12g1047 347 Gene3D - 132 260 - -
Lal12g1047 347 MobiDBLite consensus disorder prediction 307 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g1047 Lal-Chr12 9740262 9743902 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g1047 63 279 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 43.830 5.75e-50 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g1047 - - lang:109335220 412.149
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g1047 12 9740262 9743902 Lal12g1047 12 9740262 9743902 ECH