Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g1044 ATGGGTTCTTGCGATGACGATGACGATTTCTCACTCCTCCACCACCACCACCACCAGCAACCTTACCCGCCACACCACCACTTCTCCTCCGCCGCTTCTTCCGCCGTTCCGGTCCAATCGAAATCGGTCTCAGTAGACGCTGAAGACTACGGAAACCCGTTCGGCGACGAAAACACCGAGAAGAGAAAGGACCGTGAGGAGATCGGCGATGGAACAACCTCGTCATACGGTTACAACAAGCGACCGAAGACAACTTCCATAGTCAGTGGCGACGGCGGAAGCGGACGCAGTGGTGCCTCTGGAGAATACCGGAAGGACCGGGAGGAGTGGAGCGACGCGGCGATCGTGTGCCTTTTGGAAGCGTACACGGATAAGTTCACGCAGTTGAACCGGGGGAACCTGAGAGGGAGGGATTGGGAGGAGGTGGCAACGGTAGTGAGCGACCGGTGCGAGAACCAAGCGAAGAGCGTTGAGCAGTGCAAGAACAAGGTGGATAACCTCAAGAAAAGGTACAAATTGGAGAGGCATAGGGTTAACAGTGGTTGCATCTCTATTAGTCACTGGCCTTGGTTCAAGCATATGGAACAAATAGTTGGTAATTCTCTGCCTTCCAAGTTCTCGGATGAGGATAAAGCTGTTGTTGTTAGTTCTGCTGGGAATTCACCCAGACAATCGAAGAGATATGGAGTGGCAACACCCAGCAATGGTGCTCACTTAAATAGCATGAAGTCCAAACCATTACCAAACCTTAGATGGCGGAGGGTAATCCTCAAAATTAGTGGAGCAGCTCTTACTGGATCTGATACCTGCAATATTGACCCAAAGGTAGCCATGTTAGTTTCAAGAGAAGTTGCAATAGCTTCCCGCCTTGGTGTTGAGGTAGCGATTGTTGTCGGAGGTCGTAATTTCTTCTGTGGAGATGCATGGGTAACAGCAACAGGTTTAGAAAGATGTACAGCATACCAAGTTGGCATGATGGCAACTGTGATGAATTCAATATTGCTCCAATCAACTCTAGAGAAGTTGGGTGTTCAGACCCGTGTTCAAACTACAGTTGCCATGCAGGAGTTTGCCGAGCTATACAATAGGCAGCGGGCCATCAGACATCTTGAGAAAGGAAGGGTTGTTATATTTGGTGGCATTGGTTTTGGCACTGGCAATCCGTTCTTCTCAACTGACATAGCTGCTGCTCTTCGAGCTTCAGAGCTTAATGCTGAGGCAGTCCTCAAGGGTACCAACATAGATGGTGTATATGATTGTAACTCACGAGACAACAATTTCACTTTTGAGCATATATCCTTCAGGGAGCTGGTTTCAAGAGGTGCCACCTCTATGGATATGTCAGCACTGACATTCTGTGAGGAAAATGCTATTCCTGTTGTGGTTTTTAATCTATTGGAGCCTGGAAACATCTCAAAGGCTTTGTGTGGAGAACAAGTTGGCACTCTAATTGACCAAACTGGAGCAATAAGCTAA 1476 0.4851 MGSCDDDDDFSLLHHHHHQQPYPPHHHFSSAASSAVPVQSKSVSVDAEDYGNPFGDENTEKRKDREEIGDGTTSSYGYNKRPKTTSIVSGDGGSGRSGASGEYRKDREEWSDAAIVCLLEAYTDKFTQLNRGNLRGRDWEEVATVVSDRCENQAKSVEQCKNKVDNLKKRYKLERHRVNSGCISISHWPWFKHMEQIVGNSLPSKFSDEDKAVVVSSAGNSPRQSKRYGVATPSNGAHLNSMKSKPLPNLRWRRVILKISGAALTGSDTCNIDPKVAMLVSREVAIASRLGVEVAIVVGGRNFFCGDAWVTATGLERCTAYQVGMMATVMNSILLQSTLEKLGVQTRVQTTVAMQEFAELYNRQRAIRHLEKGRVVIFGGIGFGTGNPFFSTDIAAALRASELNAEAVLKGTNIDGVYDCNSRDNNFTFEHISFRELVSRGATSMDMSALTFCEENAIPVVVFNLLEPGNISKALCGEQVGTLIDQTGAIS 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g1044 491 MobiDBLite consensus disorder prediction 217 243 - -
Lal12g1044 491 MobiDBLite consensus disorder prediction 72 93 - -
Lal12g1044 491 CDD AAK_UMPK-PyrH-Ec 253 485 IPR015963 GO:0005737|GO:0006221|GO:0033862
Lal12g1044 491 PANTHER ASPARTATE/GLUTAMATE/URIDYLATE KINASE FAMILY PROTEIN 56 491 IPR011817 GO:0006221|GO:0009041
Lal12g1044 491 Gene3D - 248 485 IPR036393 -
Lal12g1044 491 Pfam Myb/SANT-like DNA-binding domain 107 197 IPR044822 -
Lal12g1044 491 Coils Coil 150 177 - -
Lal12g1044 491 Gene3D - 110 173 - -
Lal12g1044 491 PANTHER URIDYLATE KINASE 56 491 - -
Lal12g1044 491 Pfam Amino acid kinase family 254 464 IPR001048 -
Lal12g1044 491 MobiDBLite consensus disorder prediction 217 242 - -
Lal12g1044 491 MobiDBLite consensus disorder prediction 54 70 - -
Lal12g1044 491 MobiDBLite consensus disorder prediction 1 105 - -
Lal12g1044 491 Hamap Uridylate kinase [pyrH]. 250 485 IPR015963 GO:0005737|GO:0006221|GO:0033862
Lal12g1044 491 SUPERFAMILY Carbamate kinase-like 251 484 IPR036393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g1044 Lal-Chr12 9718960 9724631 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g1044 90 201 Trihelix Transcription Factor Family AT3G14180 36.522 2.85e-16 79.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lal12g1044 AA_kinase 3.1e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g1044 - - gmx:100805176 755.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g1044 12 9718960 9724631 Lal12g1044 12 9718960 9724631 ECH