Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g1037 ATGGAACCAAATGGAATATTTTCAAGCATGACTAATTCTGCAGTTCTTGGAGTAGAAAACACTTTACAGCAACAAAACCTTACAAATACTCAACATTTGCATCATCACCCACAAATGGTTTCTTATGCTAATTCACATCAAGAAGATCAACAACAACAACAACAACAATCAATGAAACTTGGGTTCCCTTCCTATTTAGCAAAGAAACAACAAAGCACTACCACCACCACCACTACTACTATGAGTGATGAAGATGAAGCAGGAGGAGGTGGAGTAACAGGAGATGACAACAACAATAGCCCAAAGAGGAAGGTTTCATCATCATCATCATCACCATGGCAGAGAATGAAGTGGAGTGATACAATGGTTAAGCTTTTGATAATGGCTGTTTATTACATTGGTGATGAAGGTGGTGGTTCTGAAACTAGTGATCCTAATGGGAAGAAGAAACCCAGTGGTGGTTTGTTGCAGAAGAAAGGGAAGTGGAAATCAGTGTCAAGGGCTATGATGGAGAAAGGGTTTTATGTGTCTCCACAACAGTGTGAGGATAAGTTCAATGACTTGAACAAGAGGTACAAGAGAGTGAATGATATTCTTGGGAAAGGTACAGCTTGTAGGGTTGTTGAGAATCAGAACTTGTTGGATACAATGGAACTTGAACCAAAGATGAAGGAAGAAGTAAGGAAATTGCTGAATTCAAAGCACCTTTTTTTCAGGGAAATGTGTGCTTATCATAATAGTTGTGGCCATGGTGGTGTTAATAATGTTCCACAACAGCAAGTTGAAGTTGGTATAGATGCATCTCAGTGTGGTCAACAGCAGCAACATAAAAGGGGTTGTTCTCATTCGTCAGAGAATGGAGGAGTGAATTTTGGTGGGACAGAACAAGAGGGTATGAGAATGTTGAAAGTTGGAAATAGCAAAGAGAATTATGATGATGAGGATAATTCTGATGATTCTAATGGTGAAGATAATTCTGATGATTCTGGTGATGATGAAAATGAATCAGGAGGTGGTTCAAGGGGTCTTGATGGGCAAGAAGATGGTTATGAGAATGATGGAAAGTTAGGGAAGAGAACAAGGACACCATCGGGATTAGGATCGGGTTTAGGATCGGGATCGGGATCATTTTCAATGTCATCTCAGTCAATGCAGAAACTGAAGATTGAGTTGAGTAATGTGTTCCAAGATGGGAGTAGGAGTGGTTGGGAGAAAAAACATTGGATGAGGCTTAGGATAATGCAGTTGGAGGAGCAGCACATAAAGTATCAAAGTGAAGCATTTGAGCTTGAGAAGCAGAGGTTCAAATGGGTAAGGTTTAGCAGCAAAAAAGAGAGGGACATGGAGAGAGCCAAAATTGAAAATGAAAGGAAAAGGTTGGAAAATGAGAGAATGATTCTTCTCATAAGGGAGAAGGAGCTTGAATTGATCAAGCTTCATAGGCTGCAACACCAACAACGTTCTTCCACCTAG 1473 0.4019 MEPNGIFSSMTNSAVLGVENTLQQQNLTNTQHLHHHPQMVSYANSHQEDQQQQQQQSMKLGFPSYLAKKQQSTTTTTTTTMSDEDEAGGGGVTGDDNNNSPKRKVSSSSSSPWQRMKWSDTMVKLLIMAVYYIGDEGGGSETSDPNGKKKPSGGLLQKKGKWKSVSRAMMEKGFYVSPQQCEDKFNDLNKRYKRVNDILGKGTACRVVENQNLLDTMELEPKMKEEVRKLLNSKHLFFREMCAYHNSCGHGGVNNVPQQQVEVGIDASQCGQQQQHKRGCSHSSENGGVNFGGTEQEGMRMLKVGNSKENYDDEDNSDDSNGEDNSDDSGDDENESGGGSRGLDGQEDGYENDGKLGKRTRTPSGLGSGLGSGSGSFSMSSQSMQKLKIELSNVFQDGSRSGWEKKHWMRLRIMQLEEQHIKYQSEAFELEKQRFKWVRFSSKKERDMERAKIENERKRLENERMILLIREKELELIKLHRLQHQQRSST 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g1037 490 MobiDBLite consensus disorder prediction 268 291 - -
Lal12g1037 490 PANTHER F16F4.11 PROTEIN-RELATED 1 487 - -
Lal12g1037 490 MobiDBLite consensus disorder prediction 307 381 - -
Lal12g1037 490 Coils Coil 441 470 - -
Lal12g1037 490 MobiDBLite consensus disorder prediction 66 84 - -
Lal12g1037 490 MobiDBLite consensus disorder prediction 365 381 - -
Lal12g1037 490 MobiDBLite consensus disorder prediction 137 159 - -
Lal12g1037 490 MobiDBLite consensus disorder prediction 268 295 - -
Lal12g1037 490 PANTHER SEQUENCE-SPECIFIC DNA BINDING TRANSCRIPTION FACTOR 1 487 - -
Lal12g1037 490 MobiDBLite consensus disorder prediction 66 114 - -
Lal12g1037 490 Coils Coil 413 433 - -
Lal12g1037 490 Pfam Myb/SANT-like DNA-binding domain 115 243 IPR044822 -
Lal12g1037 490 Gene3D - 118 194 - -
Lal12g1037 490 MobiDBLite consensus disorder prediction 93 114 - -
Lal12g1037 490 MobiDBLite consensus disorder prediction 312 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g1037 Lal-Chr12 9634498 9635970 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lal12g1037 Myb_DNA-bind_4 2e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g1037 - - gmx:100816661 443.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g1037 12 9634498 9635970 Lal12g1037 12 9634498 9635970 ECH
Lal12g1037 12 9634498 9635970 Lal24g0948 24 7997587 7999110 LSH
Lal1g1781 1 20182795 20184225 Lal12g1037 12 9634498 9635970 PCT
Lal12g1037 12 9634498 9635970 Lal1g1781 1 20182795 20184225 PCT