Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g1006 ATGGGATTTCGCATACCTCGTATTAGAACGGTTTCATTCCAAGCAGCTTCCAAGGCTGCGGAAGTCCCAAGAGGGTGTCTTGCAGTATATGTTGGAGAGAAAATGAAGCGTTTTGTGATTCCTATTTCATACTTGAGCCAACACTCATTTCAAGAATTACTAAGCCAAGCTGAAGAAAAATTCGGATATAATCATCCAATGGGTGGTCTCACAATTCCGTGCAAGGAGGATGTTTTCTTAGACCACATTTCTCACTTGAATGAGTTATAA 270 0.4074 MGFRIPRIRTVSFQAASKAAEVPRGCLAVYVGEKMKRFVIPISYLSQHSFQELLSQAEEKFGYNHPMGGLTIPCKEDVFLDHISHLNEL 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g1006 89 Pfam Auxin responsive protein 14 84 IPR003676 GO:0009733
Lal12g1006 89 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 7 87 IPR003676 GO:0009733
Lal12g1006 89 PANTHER SMALL AUXIN-UP RNA-RELATED 7 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g1006 Lal-Chr12 8865145 8865414 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g1006 14 79 Calmodulin-binding Proteins AT5G20810 50.000 2.19e-17 70.9