Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g1001 ATGAACTTGAATCATGAAATACCAGAGGTTGTAGATGAAATTGATGTTAGTGAAGATGAAAATATTAATGAAGTAGAGGAGTTTGATTTTGAAGAAATTGACTTTGGATCGTTAAACGAAGATGAAGTAAAGAAATATAGGTTTGCAAACAATGATATTGCATATAATTTTTATAAGATGTATGGTATGAAGAAAGGATTTGGCATTAGAAAATATCATACCCGTCGGGACAAGGATGGTGAAATTTTATGGCAATCATTTTTTTGTGATAGAAAGGGATTTAGGGATAAGAAAAATGAATTAGTTCGAAAAAGGGCTCCAAGAAAAGAAACGAGATGTGGTTGTTTAGCAAGAATGAAAATTCACATTGATAAGGAGAAAGTTTTTTTTGTTGATGATCATAATCATGAATTGGTTGGCGAACATTATGGTGGGATGATAGCGTCAAACCGAAGTATGACAGAAACAAACGTCGCTTTGATGAACACAATGAGAGAAGTCGGAATTGGAACATACAAATTTTTTGGTTCATTCGCCGGTCAATCTGGTGGATATAGGTATATTGGATTCTCTAAGAAAGATATGTATAATCAAATTCAGAGACAAAGAAGAATAGGAAATGGTGACGCAAAATCAGCATTACAATACTTGAAGGAAAAATCAAAATCAGATTCTGCAATGTATTGGAGACATAGTGTAGATGAAGAAGGTAAGTTGCAACAATTATTTTGGGCGGATGGATGCAGCATTTTTGACTACTCAATTTTTGGAGATGTTCTAGCTTTTGATGCAACCTATGGTCGAAACAAGTACAAATTTTCGGTGGTAATTTTTTCTGGTGTGAACCATCACAAGCAAACAACAGTATTTGCTGCTGGTATTGTGTCCAACGAGACAGAGGAAACGTACATTTGGCTTTTGGGAAATTTCTTGGAGGCAATGAATGGGAAACATCCAAAGTGTGTTATCACTGATGGTGACTTGTCGATGAAAAATGCAATCAAAAGAATTTTCCCTGCAACTTATCATAGACTATGTGCTTGA 1044 0.3477 MNLNHEIPEVVDEIDVSEDENINEVEEFDFEEIDFGSLNEDEVKKYRFANNDIAYNFYKMYGMKKGFGIRKYHTRRDKDGEILWQSFFCDRKGFRDKKNELVRKRAPRKETRCGCLARMKIHIDKEKVFFVDDHNHELVGEHYGGMIASNRSMTETNVALMNTMREVGIGTYKFFGSFAGQSGGYRYIGFSKKDMYNQIQRQRRIGNGDAKSALQYLKEKSKSDSAMYWRHSVDEEGKLQQLFWADGCSIFDYSIFGDVLAFDATYGRNKYKFSVVIFSGVNHHKQTTVFAAGIVSNETEETYIWLLGNFLEAMNGKHPKCVITDGDLSMKNAIKRIFPATYHRLCA 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g1001 347 Pfam MULE transposase domain 259 346 IPR018289 -
Lal12g1001 347 PANTHER OS02G0262500 PROTEIN 44 346 - -
Lal12g1001 347 Pfam FAR1 DNA-binding domain 56 139 IPR004330 -
Lal12g1001 347 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 44 346 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g1001 Lal-Chr12 8803882 8805020 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lal12g1001 MULE 1.3e-24 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g1001 - - lang:109327968 525.783