Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0977 ATGAGAGGAAATGGTGTAAAGAGGAAGGAAGAGAGAGGTGAAGAGATAGAGCAGATAAACACAGAGCAGCTTTGTATTCTATCTGCTTGTAGTCATTTTAGTGCATGTGTTTTAGCAGTATGTATGCCGAAAGGTTGCTATGAAGGCAGAGAAAAAGGTGGAATGAAGGTTAAAGCTGATAGAGATGAGTCATCTCCTTATGCTGCTATGCTTGCAGCCCAAGATGTTGCTACCAGATGCAAGGAACTTGGCATTACTGCTCTTCACATCAAGCTACGTGCTACTGGTGGAAACTAA 297 0.4242 MRGNGVKRKEERGEEIEQINTEQLCILSACSHFSACVLAVCMPKGCYEGREKGGMKVKADRDESSPYAAMLAAQDVATRCKELGITALHIKLRATGGN 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0977 98 Gene3D Ribosomal protein S11 3 98 IPR036967 GO:0003735|GO:0005840|GO:0006412
Lal12g0977 98 PANTHER 40S RIBOSOMAL PROTEIN S14/30S RIBOSOMAL PROTEIN S11 52 98 IPR001971 GO:0003735|GO:0005840|GO:0006412
Lal12g0977 98 PANTHER BNAA05G27530D PROTEIN 52 98 - -
Lal12g0977 98 Pfam Ribosomal protein S11 50 96 IPR001971 GO:0003735|GO:0005840|GO:0006412
Lal12g0977 98 SUPERFAMILY Translational machinery components 26 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0977 Lal-Chr12 8522779 8525278 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0977 50 98 Cytoplasmic Ribosomal Protein Gene Family AT3G11510 89.796 1.09e-26 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0977 K02955 - opi:105942259 95.1301