Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0958 ATGAATAGTGTTTCTCCTACATCTTCAAGCAAGACATATACTATAAGAGATGATGAACTCATCCAAAACTTCCTTTACAAAAAGATCCATGCAGAACTTGTGCCTAACCATCTTACCATTCTTGAATGTGACTTATATGGTTCAAAGAATCCTTGGGAGATTTGGGAAGCTTTTGAAGGGTCAAGTTATGATGGAAGGGACCTTTATATTTTCACTACCTTAAAGAAAAAATCTCTTAATGGCTCACGGTTCCTTCGCATCATTGGTTGTGGTTCTTGGGAAGCTGAAGACACTGGGAAAAAGGTAGTAGTTGAGGCCACAAATCAATGTATTGGATTGAAGAAACGTTTTCGCTTTGAGAAGAGTGGCACTGTGCATGATGGTGCGTGGATCATGCATGAATATAGCCTTGACCCATCTTTGCAAACCAATCCACTTACCAATAACTATGTTCTATGCAGATTTAGAAAGAATGGAAGACACAATCAACCAAAACAAGGTACAAAAAGAACATGTGAGGAGATGAACACTGTCACCAGAGAAAAGAAGAATACTGTTTTCATGGACCCCACAGAAAAGAGTATTGCTGTTATTGCAGTTGCTGCCAATGGCGTATCTACCGATATGAATGTTTCGTTTGGGGAAGATACTCACCAAGGAACAAGAAACCTAGAAGAGAATAAAGAGAAGAATGAAGTGCTAGAAAATGAGCATCACTTTGTTGAAGAAGATGAAGATTATTGGAAACAATCATTTCCATATCTATTGCTGGAAGGTCAAGAACACTTGATCCAAGCCAAAGGGAAAGACCATGAAATGATTCCCAATCAATTGAGCATTAGCATTTTAAAGGAGATGATGATCTTCGATAATAATGATTACTCCTTCAAATTCTAA 897 0.379 MNSVSPTSSSKTYTIRDDELIQNFLYKKIHAELVPNHLTILECDLYGSKNPWEIWEAFEGSSYDGRDLYIFTTLKKKSLNGSRFLRIIGCGSWEAEDTGKKVVVEATNQCIGLKKRFRFEKSGTVHDGAWIMHEYSLDPSLQTNPLTNNYVLCRFRKNGRHNQPKQGTKRTCEEMNTVTREKKNTVFMDPTEKSIAVIAVAANGVSTDMNVSFGEDTHQGTRNLEENKEKNEVLENEHHFVEEDEDYWKQSFPYLLLEGQEHLIQAKGKDHEMIPNQLSISILKEMMIFDNNDYSFKF 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0958 298 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 16 238 - -
Lal12g0958 298 ProSiteProfiles NAC domain profile. 7 158 IPR003441 GO:0003677|GO:0006355
Lal12g0958 298 Coils Coil 224 244 - -
Lal12g0958 298 Gene3D NAC domain 16 163 IPR036093 GO:0003677|GO:0006355
Lal12g0958 298 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 16 238 - -
Lal12g0958 298 SUPERFAMILY NAC domain 16 157 IPR036093 GO:0003677|GO:0006355
Lal12g0958 298 Pfam No apical meristem (NAM) protein 16 137 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0958 Lal-Chr12 8291251 8294303 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0958 17 155 NAC Transcription Factor Family AT5G13180 35.664 1.37e-15 73.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lal12g0958 NAM 1.4e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0958 - - aprc:113871407 232.261