Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0940 ATGGCATCTAGTAGAGGTCAAGGTGGAATTCAACAGTTGTTGGCTGCTGAACAAGAAGCGCAACGGATTGTGAATGCTGCGAAAAATGAAAAACTGGCTAGGTTGAAACAGGCCAAGGAAGAAGCTGAAAAGGAGATTGCTGAATACCGAGCCCAGCTAGAGCGTGAATTTCAAAAGAAAGTTTCAGATAGTAGTGGAGATTCTGGTGCTAATGTTAAGCGGCTGGAGCAAGAGACTGACACAAAAATTGCTCACCTGAAAATCGAGGCTGCAAGAATATCGAATGATGTTGTCACCATGCTCCTCAAGTATGTGACAACTGTGAAGAATTAA 333 0.4324 MASSRGQGGIQQLLAAEQEAQRIVNAAKNEKLARLKQAKEEAEKEIAEYRAQLEREFQKKVSDSSGDSGANVKRLEQETDTKIAHLKIEAARISNDVVTMLLKYVTTVKN 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0940 110 Coils Coil 10 59 - -
Lal12g0940 110 Gene3D - 1 110 - -
Lal12g0940 110 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT G 1 110 IPR005124 GO:0016471|GO:0046961|GO:1902600
Lal12g0940 110 Pfam Vacuolar (H+)-ATPase G subunit 7 109 IPR005124 GO:0016471|GO:0046961|GO:1902600
Lal12g0940 110 PANTHER V-TYPE PROTON ATPASE SUBUNIT G1 1 110 - -
Lal12g0940 110 TIGRFAM V_ATP_synt_G: V-type ATPase, G subunit 4 109 IPR005124 GO:0016471|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0940 Lal-Chr12 7926078 7928482 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0940 1 110 Primary Pumps ATPases(2) AT3G01390 77.273 1.18e-46 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0940 K02152 - gmx:100306550 162.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0940 12 7926078 7928482 Lal12g0940 12 7926078 7928482 ECH