Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0900 ATGAGAAAAGGAAGTGAGAATTACGAAAACGAACATGGAAATTCAGAGCGGGAAATTTTCAAAGCGTGGGCAAAGGAACTTCACGAATGTGAGAAGCATTTCAAGGTGAACGTGAAATCAGGTTTGAATTCCGACGAGGTTGAGAACCGTCGCAAAATTTACGGTTACAACGATTTGGAACAGCACGAAGGTGAATCGATTTGGAAACTGGTTCTCGAGCAGTTCAACGACACATTGGTTCGGATTCTCCTCGCCGCCGCTATTGTGTCTTTCTTACTCGCTTGGTACGGCGGCGGAGACGGCGGCACCGAGGTCACCGCCTTCGTGGAGCCTCTGGTGATTTTCCTGATACTAATTGTGAACGCGATCGTCGGCGTTTGGCAGGAGAGTAACGCTGAGAAAGCGCTTGAAGCGTTGAAAGAGATTCAATCGGAGCACGCGACGGTTATTCGCGACGGCAAGAAGATTCTTAACTTGCCGGCGAAGGAACTCGTCCCCGGCGATGTGGTTGAGCTTAGAGTTGGTGATATGGTTCCTGCTGATATGCGTGTTGTTGAGTTAATTAGTTCAACTTTGAGGTTAGAGCAGAGTTCTCTAACCAGAGAGAGCCAAGTTGTGAATAAAACTTTCAAACCTGTTGCTAGTGATGCTGACATTCAAGGGAAAACTTGTATTGTTTTCGCCGGAACGATGGTGGTTAACGGGAATTGTATTTGTTTGGTTACTAATACAGGTATGGAAACTGAGATTGGTAAGGTTCATAAGCAGATTCATGTCGCCGCGCAAAGTGAAGAGGATACACCTTTGAAAAAGAAGCTTAATGAGTTTGGAGAGATGTTGACATTGATAATTGGGGTTATATGTGCATTGGTTTGGCTAATTAATGTTAAGTATTTCTTGAATTGGGAATATGTGAATGGATGGCCAAGGAATTTTAAGTTTTCATTTGAGAAGTGCACTTATTACTTTGAGATTGTTGTGGCTTTGGCTGTAGCTGCTATTCCTGAAGGGTTGCCTGCGGTTATCACGACTTGCTTGGCGCTTGGTACACGAAAAATGGCCCAAAAGAATGCCCTTGTTCGAAGGCTTCCTAGTGTGGAAACTCTGGGTTGTACAATTGTTATTTGTTCTGATAAAACAGGCACCTTGACAACGAATCAGATGGCAGTGGCGAAACTCGTGGCAATTGGATCGGAACCAGACATGCTGCGATCCTTCAAGGTGGAAGGAACTACTTACAATCCATCTGATGGTAAAATAGAGGACTGGCCAGTGGGTCAATTGGATGCTAATCTTGAGATGATAGCTAGAATTGCAGCCATATGCAATGATGCTGCAATTGCTCGGTCGGAGAATAAGTTTGTCACCAGTGGAATGCCTACTGAAGCAGCCTTAAAGGTTCTGGTTGAGAAGATGGGCCTTCCTGAAGGATCCAAGGATGTACTCTCAGCAAGTGCAAGTACCTTATTACGTTGTTGTGAATGGTGGAATGAACATGACCGTCGGATTGCTACTCTTGAGTTTGACCGCGATAGGAAGTCAATGGGTGTTATTGTGGACTCTGGTCTTGAGAATAAAACACTTCTAGTAAAGGGCGCTGTAGAAAATTTGCTTGAAAGAAGCTCTAAAATTCAGTTGCGTGATGGTTCTGTTGTGAAACTGGACGATAATGCTAGGAACCTTGTGCTGGAAGCTCTTAGTGAGATGTCAACTCGTGCATTACGCTGTTTGGGATTTGCATACAAGGATGAGCTCCCTATTTTTGATAGCTACAGTGGCAATGATGATCACCCAGCTCATCAGCTTTTGCTCAACCCTTCCAACTATTCATTAATCGAAAATGAACTTATTTTTGTTGGATTGGTTGGGTTGAGGGATCCTCCTAGGAAGGAGGTACACCAAGCAATTGAGGACTGCAGAGCAGCTGGAATTCGTGTTATGGTTATTACTGGAGACAACAAGAACACAGCAGAAGCTGTCTGCTGTGAAATAGGTTTATTTGGACCCAATGAAGACATTAGTTCAAGAAGCATAACTGGGAAGGAGTTTGTGAAGCTGCATGACAAAAAAGGCTATTTGAGACAGAATGGTGGGCTTTTGTTTTCAAGGGCAGAGCCTACTCATAAGCAAGAAATTGTGAGGCTGCTCAAAGAGGAAGGGGAGGTGGTGGCTATGACTGGAGATGGTGTTAATGATGCACCTGCCTTAAAGCTTGCTGATATTGGCATCGCAATGGGCATTGCAGGGACTGAGGTTGCAAAGGAATCTTCGGATATGGTGTTGGCTGATGATAATTTTAATACAATTGTTGCTGCTGTCGGTGAAGGTAGATCTATTTACAATAATATGAAGGCCTTTATCAGGTACATGATCTCTTCCAACATGGGAGAGGTTGCTTCTATATTTCTAACTGCTGCCTTAGGTATTCCTGAAGGATTGATACCTGTCCAGCTTCTGTGGGTCAATCTTGTCACAGATGGGCCCCCTGCAACAGCCTTGGGATTTAATCCTCCAGATAAGGATATAATGAAAAAGCCTCCTCGTAACAAAGATGATTCGCTAATTAACTTGTGGATTTTATTTCGCTATATGGTTGTTGGAATGTATGTTGGATTAGCTACAGTTGGTGTCTTCATCATATGGTATACACATGGTTCCTTCTTGGGTGTTGACCTTAGCGGGGACGGCCACACCCTTGTCACTTACAATCAACTTGCCAACTGGGGTCAGTGCCCCACTTGGAACAATTTCACAGTTTCTCCCTTTACCGCTGGTGCTAGAGTTCTCTCTTTTGATAATAACCCCTGTAATTATTTCCACGCCGGAAAAGTAAAAGCTACCACTCTCTCCCTCTCTGTATTGGTAGCCATAGAAATGTTCAACTCTCTCAATGCCCTGTCCGAGGACGGAAGCCTTTTAACAATGCCTCCTTGGGTCAATCCTTGGCTTCTTTTAGCAATGCTGGTGTCATTTAGTCTTCACTTTTCGATTTTTTATGTGCCATTCTTAGCCCAAATATTTGGCATTGTGCCCCTTAGCTTCAATGAGTGGCTTTTGGTTCTGGTTGTTGCATTCCCTGTGATTATAGTTGACGAGATACTAAAATTTGTGGGGAGGTGTACCAGTGAATCTCAAACATCACAGGCAAGAAGATCAAAGCAAAAGTCAGAGTAG 3174 0.4392 MRKGSENYENEHGNSEREIFKAWAKELHECEKHFKVNVKSGLNSDEVENRRKIYGYNDLEQHEGESIWKLVLEQFNDTLVRILLAAAIVSFLLAWYGGGDGGTEVTAFVEPLVIFLILIVNAIVGVWQESNAEKALEALKEIQSEHATVIRDGKKILNLPAKELVPGDVVELRVGDMVPADMRVVELISSTLRLEQSSLTRESQVVNKTFKPVASDADIQGKTCIVFAGTMVVNGNCICLVTNTGMETEIGKVHKQIHVAAQSEEDTPLKKKLNEFGEMLTLIIGVICALVWLINVKYFLNWEYVNGWPRNFKFSFEKCTYYFEIVVALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRRLPSVETLGCTIVICSDKTGTLTTNQMAVAKLVAIGSEPDMLRSFKVEGTTYNPSDGKIEDWPVGQLDANLEMIARIAAICNDAAIARSENKFVTSGMPTEAALKVLVEKMGLPEGSKDVLSASASTLLRCCEWWNEHDRRIATLEFDRDRKSMGVIVDSGLENKTLLVKGAVENLLERSSKIQLRDGSVVKLDDNARNLVLEALSEMSTRALRCLGFAYKDELPIFDSYSGNDDHPAHQLLLNPSNYSLIENELIFVGLVGLRDPPRKEVHQAIEDCRAAGIRVMVITGDNKNTAEAVCCEIGLFGPNEDISSRSITGKEFVKLHDKKGYLRQNGGLLFSRAEPTHKQEIVRLLKEEGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKESSDMVLADDNFNTIVAAVGEGRSIYNNMKAFIRYMISSNMGEVASIFLTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPRNKDDSLINLWILFRYMVVGMYVGLATVGVFIIWYTHGSFLGVDLSGDGHTLVTYNQLANWGQCPTWNNFTVSPFTAGARVLSFDNNPCNYFHAGKVKATTLSLSVLVAIEMFNSLNALSEDGSLLTMPPWVNPWLLLAMLVSFSLHFSIFYVPFLAQIFGIVPLSFNEWLLVLVVAFPVIIVDEILKFVGRCTSESQTSQARRSKQKSE 1057
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0900 1057 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 700 807 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal12g0900 1057 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 315 398 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal12g0900 1057 SUPERFAMILY Calcium ATPase, transduction domain A 144 256 IPR008250 -
Lal12g0900 1057 Pfam Cation transporting ATPase, C-terminus 811 1037 IPR006068 -
Lal12g0900 1057 SUPERFAMILY Calcium ATPase, transmembrane domain M 22 1040 IPR023298 -
Lal12g0900 1057 PANTHER RETICULUM [ER]-TYPE CALCIUM ATPASE, PUTATIVE-RELATED 9 1054 - -
Lal12g0900 1057 Gene3D - 73 1039 - -
Lal12g0900 1057 Pfam E1-E2 ATPase 142 356 - -
Lal12g0900 1057 SFLD p-type atpase 357 778 IPR044492 -
Lal12g0900 1057 PANTHER CALCIUM-TRANSPORTING ATPASE 9 1054 - -
Lal12g0900 1057 SUPERFAMILY HAD-like 374 830 IPR036412 -
Lal12g0900 1057 Gene3D - 41 260 - -
Lal12g0900 1057 Gene3D - 373 771 IPR023214 -
Lal12g0900 1057 SFLD Haloacid Dehalogenase 357 778 - -
Lal12g0900 1057 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 383 624 IPR023299 GO:0000166
Lal12g0900 1057 Gene3D - 386 627 IPR023299 GO:0000166
Lal12g0900 1057 Pfam Cation transporter/ATPase, N-terminus 23 90 IPR004014 -
Lal12g0900 1057 SMART Cation_ATPase_N_a_2 21 95 IPR004014 -
Lal12g0900 1057 Pfam haloacid dehalogenase-like hydrolase 374 740 - -
Lal12g0900 1057 ProSitePatterns E1-E2 ATPases phosphorylation site. 378 384 IPR018303 -
Lal12g0900 1057 PRINTS P-type cation-transporting ATPase superfamily signature 195 209 - -
Lal12g0900 1057 PRINTS P-type cation-transporting ATPase superfamily signature 376 390 - -
Lal12g0900 1057 PRINTS P-type cation-transporting ATPase superfamily signature 620 631 - -
Lal12g0900 1057 PRINTS P-type cation-transporting ATPase superfamily signature 642 652 - -
Lal12g0900 1057 PRINTS P-type cation-transporting ATPase superfamily signature 726 745 - -
Lal12g0900 1057 PRINTS P-type cation-transporting ATPase superfamily signature 750 762 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0900 Lal-Chr12 7450958 7456417 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0900 1 1057 Primary Pumps ATPases(2) AT1G07810 76.199 0.0 1659
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0900 K01537 - gmx:100812151 1787.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0900 12 7450958 7456417 Lal12g0900 12 7450958 7456417 ECH