Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0877 ATGGCTAGTTGCAGCATGGCATTAGCTGCATCTGGGTTTGTGTTGTCACCTAATGTTGTTACAAACTCATTATCTTCCAGGAGCAGCACAATGGTGATGTTCCCTACAAAGAACATTAATGGTTCTTCTTCTAGGCTTGTTTCTGTCAGGGCTGCAGATGATGCTGCTTCTGTGGCTGCACCTGCACCAGTAGGAGAAGTGTCTAAGAATCCCAAGCCACCACAAGTTGGCCCCAAGAGAGGTACCAAGGTCAAGATTCTTAGGAGGGAATCTTATTGGTATAAAGAATCTGGTTCAGTTGTTGCTGTTGATCAGGATCCCAAGACTCGTTACCCGGTTGTGGTTCGATTCAACAAAGTTAACTATGCAAATGTATCAACAAACAACTATGCTTTGGATGAGATTGCTGAAGTCAAATGA 420 0.4381 MASCSMALAASGFVLSPNVVTNSLSSRSSTMVMFPTKNINGSSSRLVSVRAADDAASVAAPAPVGEVSKNPKPPQVGPKRGTKVKILRRESYWYKESGSVVAVDQDPKTRYPVVVRFNKVNYANVSTNNYALDEIAEVK 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0877 139 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT IV A, CHLOROPLASTIC-RELATED 1 139 IPR003375 GO:0009522|GO:0009538|GO:0015979
Lal12g0877 139 Pfam Photosystem I reaction centre subunit IV / PsaE 79 138 IPR003375 GO:0009522|GO:0009538|GO:0015979
Lal12g0877 139 SUPERFAMILY Electron transport accessory proteins 78 138 IPR008990 -
Lal12g0877 139 MobiDBLite consensus disorder prediction 62 81 - -
Lal12g0877 139 Gene3D - 72 139 - -
Lal12g0877 139 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT IV A 1 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0877 Lal-Chr12 7210190 7213565 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0877 K02693 - jre:109008563 186.037
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0877 12 7210190 7213565 Lal12g0877 12 7210190 7213565 ECH
Lal12g0877 12 7210190 7213565 Lal13g1072 13 8018208 8020286 LSH
Lal12g0877 12 7210190 7213565 Lal24g0807 24 6394550 6396654 LSH