Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0862 ATGTATATCCAAATTCAGTTTTTGTTTTTCTTAATCTTCTTATGTTACATGGGTTGTTCCTATAATGGTTTTACTTTTGCAGCAAATGATGAAGCATTAGCATTGTTTTCTGTAAAAAAAGGTCTAATTGATCCATTGAATAGCCTCCATGATTGGAAATTGGATGCAGTTCATTGCAACTGGACTGGTGTGTGGTGCAACTCAGATGGAGAAGTTGAGAAGCTTGATCTCTCTCACATGAATCTGAGTGGAAAAGTTTCCAATGAGATACAAAAGCTGAAAAGTCTTGCTTTTTTTAATATATGCTGCAATGGGTTTTCATCATCATTGTCAAATTCTATAACCAATCTTACCACACTCAAGATTATTGATGTAAGCCAGAATTTCTTCATTGGTGACTTTCCATTAGGCCTTGGAAAGGTTTCAGGGCTTGTGACCTTAAATGCTTCAAGCAACAGTTTCTCAGGTTTTGTTCCTGAGGACCTTGGAAATGTGTCTTCCTTAGAGACCCTTGATTTCAGAGGTAGCTTCTTTGAAGGGTCAGTTCCAAAGACATTGAGCAACTTGCATAAGTTGAAGTTTCTTGGTCTATCTGGGAATAATCTCACTGGTGAAATCCCAAGGGAGCTTGGAAAACTTTCATCATTGGAGACTATGATCATTGGCTACAATGAATTTGAAGGAGGGATTCCTGAAGAGTTTGGAAATCTCACAAATCTTAAGTATCTTGATATAGCAGATGGTAATCTTGGTGGTGAGATTCCATCTGAGTTGGGAAGGCTCAAGTTATTGGATACAGTTTTCTTATACAAGAACAATTTTGAAGGCGTGATTCCGGAAGAAATTGGAAACATGATTTCATTGGTGTTGCTGGATCTCTCAGATAACATGTTGTTAGGAAATATTCCAGCTGAAGTAAGTGAGTTGAAGAATTTGCAGCTTCTGAACTTGATGCGAAACCGGCTATCTGGTCCTGTGCCTTCTGGTCTTGGGAATTTGCCTCAACTTGAAGTGCTTGAGCTATGGAACAATTCCTTGTCAGGGACATTGCCTAGTAACCTTGGTAAGAATTCTGCATTGCAGTGGTTGGATGTATCATCCAATTCACTCTCTGGTGAAGTTCCGGAAACTCTTTGCACTAAGGGAAATCTCACCAAGCTTATACTTTTCAATAATGCATTCTTGGGTCCAATTCCAGAAAGCCTATCGACATGTCCTTCGCTTGTTCGTGTTCGAATTCATAATAATTTTCTTTCTGGCACAATTCCTATAGGTCTTGGCAAGCTTGGGAAGCTTCAAAGGTTAGAATTGGCTAATAATAGTCTCACTGGTAGAATTCCTGATGACATTGCTTCTTCCACATCCCTTTCTTTCATCGATTTCTCGAAAAACAACCTTCACTCTTCTCTTCCTTCCACCATTGTTTCCATTCCAAATTTGCAAACTTTGATTGTCTCCAACAACAACCTAGAAGGTGAAATCCCAAAGCAATTTCAGGATTGTCCCTCACTTAGTGTCCTTGACCTCTCATCGAATCATTTCTTTGGAAGCATTCCGAAAAGCATTGCTTCATGTCAGAAATTGGTTAGCTTGAACCTAAAGAACAATAAACTGAGTGGTGAAATCCCAAAAGCATTAGCAAGCATGCCTACACTGGCCATTCTTGATCTTACTAACAACTCTCTAACTGGTCAAATACCCGAAAATTTCGGCGTCTCTCCGGCTCTAGAAATATTTAATGTCTCATACAATAGGCTAGATGGTCCTGTCCCAGAAAATGGTGTGCTAAGAACAATAAACCCAAATGATATTGTAGGCAATGCTGGCCTATGTGGTGGTGTACTCCCTGCATGTGGCCTAACATTTGCATATCCTTCAAGGCACGGGAACTCACAAACAAAGCCAATTATCACAGGATGGATCATAGCAATATTATCAATCTTAGCCATTGGGATTGCAATTTTGGCAGCAAGATCTTTATACACAAGGTGGTACAATGATGGGTTATGCTTTAGTGAAAGATTTTACAAGGGTAGAAAAGGGTTGCCATGGAGATTGATGGCATTTCAGAGGCTTGATTTTACAAGTACTGACATTTTATCTTGCATCAAGGAAACAAATGTGATCGGCATGGGCGCGACTGGGGTTGTTTATAAAGCTGAGGTACCACAATCAAGTACAGTTGTGGCAGTTAAAAAACTGTGGAGATCATCAGGATCTGATATTGAAGTAGGAAGCAGTGATGACCTTGTTGGAGAAGTGAATCTTTTAGGAAGACTGAGGCATAGGAACATTGTTAGACTACTAGGTTTTCTTTATAATAACACTGATGTGATGATAGTTTATGAATTTATGCTTAATGGTAACCTTGGAGATGCCTTGCATAGCAAGCAACCAGAAGGAACACTGCTTGTAGATTGGGTTTCAAGGTATAACATAGCAGTAGGAGTTGCACAAGGACTTGCTTATCTTCATCATGATTGTCATCCACCTATTATCCATAGAGATATTAAGTCAAATAATATACTTCTTGATGCAAATCTTGAGGCAAGAATAGCCGATTTCGGGTTAGCCAAGATGATGATCAGGAAGAATGAAACAGTCTCCATGATTGCTGGATCCTATGGATACATTGCCCCTGAATATGGATACTCTTTGAAGGTGGATGAAAAGATTGACATTTACAGTTATGGAATAGTTTTACTAGAGCTTCTCACAGGAAAGAGGCCTTTAGATCCAGAATTTGGAGAATGTATAGATATTGTAGGATGGATTAGAAGGAAAATGGACAATGGATGTTCAGAAAAAGCATTAGACCCAAGTGTAGGAAACTGCATGCATGTTCAAGAAGAGATGCTTTTGGTTCTCAGAATAGCACTTCTTTGCACTGCCAAGATCCCCAAGGATAGACCCTCCATGAGGGATGTTATAATGATGCTAGGAGAGGCAAAGCCTAGGAGAAAAAGCAGTGTCAGCACTGAAACATTACCACTTAACAAGGACATGCCACTTATTAGTACATTACCAGTTAATGGTCTTGTGTAG 3045 0.3944 MYIQIQFLFFLIFLCYMGCSYNGFTFAANDEALALFSVKKGLIDPLNSLHDWKLDAVHCNWTGVWCNSDGEVEKLDLSHMNLSGKVSNEIQKLKSLAFFNICCNGFSSSLSNSITNLTTLKIIDVSQNFFIGDFPLGLGKVSGLVTLNASSNSFSGFVPEDLGNVSSLETLDFRGSFFEGSVPKTLSNLHKLKFLGLSGNNLTGEIPRELGKLSSLETMIIGYNEFEGGIPEEFGNLTNLKYLDIADGNLGGEIPSELGRLKLLDTVFLYKNNFEGVIPEEIGNMISLVLLDLSDNMLLGNIPAEVSELKNLQLLNLMRNRLSGPVPSGLGNLPQLEVLELWNNSLSGTLPSNLGKNSALQWLDVSSNSLSGEVPETLCTKGNLTKLILFNNAFLGPIPESLSTCPSLVRVRIHNNFLSGTIPIGLGKLGKLQRLELANNSLTGRIPDDIASSTSLSFIDFSKNNLHSSLPSTIVSIPNLQTLIVSNNNLEGEIPKQFQDCPSLSVLDLSSNHFFGSIPKSIASCQKLVSLNLKNNKLSGEIPKALASMPTLAILDLTNNSLTGQIPENFGVSPALEIFNVSYNRLDGPVPENGVLRTINPNDIVGNAGLCGGVLPACGLTFAYPSRHGNSQTKPIITGWIIAILSILAIGIAILAARSLYTRWYNDGLCFSERFYKGRKGLPWRLMAFQRLDFTSTDILSCIKETNVIGMGATGVVYKAEVPQSSTVVAVKKLWRSSGSDIEVGSSDDLVGEVNLLGRLRHRNIVRLLGFLYNNTDVMIVYEFMLNGNLGDALHSKQPEGTLLVDWVSRYNIAVGVAQGLAYLHHDCHPPIIHRDIKSNNILLDANLEARIADFGLAKMMIRKNETVSMIAGSYGYIAPEYGYSLKVDEKIDIYSYGIVLLELLTGKRPLDPEFGECIDIVGWIRRKMDNGCSEKALDPSVGNCMHVQEEMLLVLRIALLCTAKIPKDRPSMRDVIMMLGEAKPRRKSSVSTETLPLNKDMPLISTLPVNGLV 1014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0862 1014 SMART serkin_6 703 959 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal12g0862 1014 ProSitePatterns Serine/Threonine protein kinases active-site signature. 832 844 IPR008271 GO:0004672|GO:0006468
Lal12g0862 1014 Gene3D Ribonuclease Inhibitor 381 621 IPR032675 -
Lal12g0862 1014 Gene3D Ribonuclease Inhibitor 227 380 IPR032675 -
Lal12g0862 1014 SMART LRR_typ_2 333 357 IPR003591 -
Lal12g0862 1014 SMART LRR_typ_2 429 453 IPR003591 -
Lal12g0862 1014 SMART LRR_typ_2 189 213 IPR003591 -
Lal12g0862 1014 SMART LRR_typ_2 237 261 IPR003591 -
Lal12g0862 1014 SMART LRR_typ_2 477 500 IPR003591 -
Lal12g0862 1014 SMART LRR_typ_2 549 573 IPR003591 -
Lal12g0862 1014 SMART LRR_typ_2 285 309 IPR003591 -
Lal12g0862 1014 Pfam Protein kinase domain 705 914 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal12g0862 1014 Gene3D Transferase(Phosphotransferase) domain 1 785 1000 - -
Lal12g0862 1014 PANTHER UNNAMED PRODUCT 10 993 - -
Lal12g0862 1014 Gene3D Ribonuclease Inhibitor 140 226 IPR032675 -
Lal12g0862 1014 SUPERFAMILY RNI-like 194 570 - -
Lal12g0862 1014 Pfam Leucine rich repeat 478 538 IPR001611 GO:0005515
Lal12g0862 1014 ProSitePatterns Protein kinases ATP-binding region signature. 709 733 IPR017441 GO:0005524
Lal12g0862 1014 SUPERFAMILY L domain-like 352 443 - -
Lal12g0862 1014 Pfam Leucine rich repeat N-terminal domain 28 67 IPR013210 -
Lal12g0862 1014 Gene3D Ribonuclease Inhibitor 30 139 IPR032675 -
Lal12g0862 1014 Gene3D Phosphorylase Kinase; domain 1 694 784 - -
Lal12g0862 1014 SUPERFAMILY L domain-like 29 264 - -
Lal12g0862 1014 ProSiteProfiles Protein kinase domain profile. 703 987 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal12g0862 1014 SUPERFAMILY Protein kinase-like (PK-like) 697 980 IPR011009 -
Lal12g0862 1014 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 10 993 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0862 Lal-Chr12 7056878 7060539 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0862 3 1014 Receptor kinase-like Gene Family AT1G08590 60.038 0.0 1172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lal12g0862 Pkinase 2.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0862 - - gmx:100788430 1625.14