Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0853 ATGGGAACAAATATGAGCTATCCAAAAACTGATAAGATTTCTGAAGAAGGTGAAAATGACCTTCTCATATATGGTTTATCATCTATGCAAGGCTGGCGTACAACAATGGAAGATGCACATGCTGCACACCTTGATCTGGCTCCATCCACTTCATTTTTCGGTGTTTATGATGGTCATGGAGGTAAGGTGGTTGCGAAGTTTTGTGCTAAGTACCTTCACCAACAGGTACTCAAGAGTGAAGAATACATGGCTGGAGATGTAGGAGCCTCTCTTCAGAAAGCTTTTTTCAGAATGGACGAGATGATGCGTGGTCAAAGGGGGTGGAGAGAATTAGCAGTCTTAGGTGATAAGATAAACAGGTCGAATGGGAAGATGGAAGGGTCGATTTCGTCTCCGCGAAGTGGTGATGGTAATGACCAAGGTGAATATGATTGGGCTTTTGAGGAGGGGCCTCATTCTGATTATGCTGGACCAACTTCAGGAAGCACTGCCTGTGTTGCACTTATCAGAAACAACAAACTTTTTGTTTCGAATGCTGGCGATTCACGTTGTGTAATATCTAGGAATAGTCGGGCATACAATTTGTCTAGAGATCACAAACCTGATCTCGAGATTGAGAAAGAAAGAATCATAAAAGCTGGTGGTTTTATTCATGCAGGAAGAATTAATGGGAGTTTAAATCTTGCAAGAGCTATAGGCGACATGGAATTTAAACAGAACAAATTTCTTTCTACTGAAAAACAAATTGTGACTGCCAATCCAGACATAAACACTGTTGACCTTTGTGATGAACATGAATTTATGGTGCTAGCATGTGATGGCATATGGGATTGCTTGTCAAGCCAACAGCTGGTAGATTTTGTGCATCAAGAACTGCTCTTGGGAACAAAACTTTCTGTGGTGTGTGAAAGAGTACTCGATCGATGTTTGGCGCCGTCGATCACCATTGGTGCAGGATGTGATAACATGACAATGGTCTTGGTGCAATTCAAAATAACTGGTCAGTACAGTGCAGCAGCAGAAGAGGATAAATCTTCTTCAAATGAAGAAAACTAG 1056 0.4167 MGTNMSYPKTDKISEEGENDLLIYGLSSMQGWRTTMEDAHAAHLDLAPSTSFFGVYDGHGGKVVAKFCAKYLHQQVLKSEEYMAGDVGASLQKAFFRMDEMMRGQRGWRELAVLGDKINRSNGKMEGSISSPRSGDGNDQGEYDWAFEEGPHSDYAGPTSGSTACVALIRNNKLFVSNAGDSRCVISRNSRAYNLSRDHKPDLEIEKERIIKAGGFIHAGRINGSLNLARAIGDMEFKQNKFLSTEKQIVTANPDINTVDLCDEHEFMVLACDGIWDCLSSQQLVDFVHQELLLGTKLSVVCERVLDRCLAPSITIGAGCDNMTMVLVQFKITGQYSAAAEEDKSSSNEEN 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0853 351 MobiDBLite consensus disorder prediction 123 137 - -
Lal12g0853 351 Pfam Protein phosphatase 2C 157 312 IPR001932 -
Lal12g0853 351 Pfam Protein phosphatase 2C 24 103 IPR001932 -
Lal12g0853 351 CDD PP2Cc 23 330 IPR001932 -
Lal12g0853 351 MobiDBLite consensus disorder prediction 122 141 - -
Lal12g0853 351 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169
Lal12g0853 351 Gene3D - 1 331 IPR036457 -
Lal12g0853 351 SMART PP2C_4 13 328 IPR001932 -
Lal12g0853 351 ProSiteProfiles PPM-type phosphatase domain profile. 23 330 IPR001932 -
Lal12g0853 351 PANTHER PROTEIN PHOSPHATASE 2C 60 ISOFORM X1-RELATED 1 337 - -
Lal12g0853 351 PANTHER PROTEIN PHOSPHATASE 2C 1 337 IPR015655 GO:0004722|GO:0006470
Lal12g0853 351 SUPERFAMILY PP2C-like 4 331 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0853 Lal-Chr12 6990277 6995443 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0853 1 344 PP2C-type Phosphatase Gene Family AT2G25070 72.384 0.0 537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0853 K17499 - gmx:100787778 558.91