Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0841 ATGGTTTCTCTGTCAACATGGGTTCGATACGTTGCACACAAGCTTCAATACTCTGCTTCTATTAGCTGGAAGAACTATACAGGTGGTCAAATTACAGACAGACAGCTCGGTGATGCTGTTTGGAGGAACCTTTTTCAAGGAAAGTTGACATACATGCACTGGAATAAAGGAGAGGAGATGGCCCCGACCATTGCTGGAAAAGAAGTAACTCTCGTTCGTAAAATACCAATTGCAGATCCAAAGTCTGTTTTTGTAGGAGATGTTGTCGTCTTGAAGGACCCCGAGAAGCCAGATAACTTTCTTGTCAGGAGATTAACTGCGGTCGAAGGTTATGAAATGGTTTCAACTGATGAAAAGGAAGAGCCCTTTGTTCTTGAGAAGGATCAATGCTGGGTAGAGTCTGACAATGAAAAATTGAAAGCCAAGGAAGCAAATGATAGCCGTAAATTTGGCCCGGTTCAGATGACAGACATTGTAGGCAGAGTCATATATTGCCTGCGAAATGCCGTAGACCATGGCCGTGTAGAAAACAGTGATTTCAGCATGCAAAAGGATTCACCAGTGTTGGAAGTGGAACTTGATGTTGATGAAATGGCAAAGAGTCAGAAAGACTAA 615 0.4293 MVSLSTWVRYVAHKLQYSASISWKNYTGGQITDRQLGDAVWRNLFQGKLTYMHWNKGEEMAPTIAGKEVTLVRKIPIADPKSVFVGDVVVLKDPEKPDNFLVRRLTAVEGYEMVSTDEKEEPFVLEKDQCWVESDNEKLKAKEANDSRKFGPVQMTDIVGRVIYCLRNAVDHGRVENSDFSMQKDSPVLEVELDVDEMAKSQKD 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0841 204 CDD S26_SPase_I 56 162 IPR019533 GO:0004252|GO:0006465
Lal12g0841 204 SUPERFAMILY LexA/Signal peptidase 56 174 IPR036286 -
Lal12g0841 204 Gene3D Umud Fragment, subunit A 49 175 - -
Lal12g0841 204 PANTHER OSJNBA0068L06.9 PROTEIN 1 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0841 Lal-Chr12 6848207 6855440 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0841 86 164 MADS-box Gene Family AT1G29960 30.588 8.24e-06 42.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0841 - - gmx:100500100 352.058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0841 12 6848207 6855440 Lal12g0841 12 6848207 6855440 ECH
Lal12g0841 12 6848207 6855440 Lal24g0784 24 6087960 6094931 LSH