Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0829 ATGTTTAGCAGACCAAGGGATTCAAGTGCGTTCAGTATATTCAAATGGAAACTTGAGAATGAATCATCAGTGACTACAGGTTTACTTCAGGATGTTCCGCCAGAGATTGAATTGTATGATTATAGAAGGATCCCAAGTCCAGGCAGTGAGAGCCCTTCAGGGCTTCTTAATGGTGAAAGCGTAAATGCAGAACCAATTGCCGACTTGGATCTCTTCTTTGAAAGGCTTTACAGTTACTACTGTGAGAAAGGACTTTGGTGCATCATTATAAAGTGGATTGTTGAACTTTCGAGTCTAGGGTTCACCATATGTTTTTCAGGATTCTTTTTATTATATGTTGATTGGAATGGCCTTCGTAATGCAAAGTGTGGGATGGGTGCGGTTGAGTATGGAATTAAGCCCTGTGATCTTGCTAAAGAAGCTCTACATCAACACCCTTTGATTCCATTAACATTTAAGAAAGCTATTATTGTTGGATACTTGGGAATATTTTCCATCTATTGGATATTTTGCTTCTTGAGATTTTTTGCTCAACTGAAGTGTACTCTGGAAATCCGACAGTTTTACTACAATAGTCTCCATGTTACCGACAATGAAATTCAAACCATGCCCTGGGCTACGGTTATTGAAAAAGTTGTCCAGGTGCAAAGCTCTCAACAACTATGTGTGGTAAAGGATCTTTCTGCTCATGACATGGTGTTGAGGTTGATGCGAAAGGAAAACTACTTGATTGGAATGATCAACAAGGGTGTGCTTGCTTTCCCCATTTCTCAGTGGGTCCCAGGTGTTGGTCCTACTGTGAAATCTGGTCCTAATGGAACACAATATCGTCTAATACTAACCAAGACCCTTGAGTGGACTTTGAATTGGTGCATCCTTCAAAGCATGTTTGATCGAAACTTTTGTGTCAGAATGGATTTTATATCAAATCCAAGGACATTAAAGAAAAGGCTTATGGTAGTTGGGCTTGCTATGCTTTTACTTTCTCCATTTATAGTCATATTCATGCTGGTATATCTCTTTCTGAGGCATGCTGAGCAGTTTTATAATCACCCAAGCACAGCATCCTCTCGAAGATGGTCAAACTTGTCAAGGTGGATTTTTAGGGAGTTCAATGAGGTGGACCATCTCTTCAAGCATCGGATTAATAGCAGTGGATTACATGCTTCTGATTATCTCAAGCAATTTCCTTCACCTATCATATCTATCACTGCAAAATTCATCTCCTTTGTGTCGGGTGGCTTTGCTGCAGTTCTGATCATCATTGCTTTTCTCGAGGAGTCTCTGCTGGAGGGCCATATATTTGGTCGGAACTTGCTGTGGTATGCTGCTGTTTTTGGAACTATAACAGCAATTAGCCGGGCTGCGATCACAGATGAGCTTCTGGTGTTAAACCCTGAAAGAGCAATGTCTATGGTAGTTCAGCATACACATTATATGCCAAAGAGATGGCGTGGAAAAGAATGTACTGTAAATGTCCGAATTGAGTTTGAAACCTTATTCCAGTACACTGGGATGATGTTACTTGAGGAGATAGCATCAATTTTCCTTACTCCATACTTACTTCTATTTGTTGTCCCAAAGCGGGTTGATGATATCTTGCAGTTCATTGCAGATTTTACTGTGAATGTTGAAGGTGTAGGTCATGTTTGCAGCTTTAGTAGCTTTGATTTTCAAGAGCATGGAAACAGTAATTATGGCTCCCCGCACAACGCTCCTCACAGCCGGAGGAGTTCCTGGGGGAAGTTTGAGAAGTCGTTTTTAAGCTTTCAGAGCAGTTATCCTTCATGGGAATCAAATGCTCAAGGTAAGCAATTTTTGCAAAATCTGAGAACCTTCAAAGAGCAAAAGTTACCAGGACATGTAAATAGATATGCATATTCCCCTCCTAAAATGTGGAAAGGTAGTCCGAATATGGGAAGCAATGGAGACAGAAACAGGTTTATATCTCGGGAAATGTCACATAGTATTTTCGAAACTGGCAATCACTTGGGTTCATTGTGGCTAATTGAAGCCAATCAAAACAATCATCCCTATCTTCTCGATTGGTACTATACTTCCCGACCTCACGATATGACTTCCACAGAGGTTCCAATTCCAAATGATCGATTTGATGTTACCGATCGTCATTCTAGAGTTTGGATGCCCTCAAACTTGACACAAAATGAACCTGGCTATGAGGAATACTTGAATGAGTATCATGATGGTCGAGCTGCTTCTCATCTCGGAGCTTCCATATCAGCTCCCATCTTCCGGGAAAGCTTAACTCAGGATCAAAGTTCCAATGATCTTCCCCACACTACCAGGAGCCATTGGTGGGCTAGAAGTCACTACCAGGATGGACCGGGTCAAACAAGCTTCTTCGAGCCTCCAGATTTCAATCAGCAAATATCATATAATAACTATTTTGATAAATTTTCTGATAGAGGGTCAGAGGGTCATCATGAGCAAGAACAACAGATGTATAGGAGAGATCAGCACAATTTATCTAGAACAGCATTCACCGATGACTTAGAGGCTGGAGAATTCGATCTTCATTTTGATGATATTTATAGCAGCAGGCCTCCACAATATCCCACTGTAAATTCAAGCACTGCAAGCTTTTGA 2607 0.4097 MFSRPRDSSAFSIFKWKLENESSVTTGLLQDVPPEIELYDYRRIPSPGSESPSGLLNGESVNAEPIADLDLFFERLYSYYCEKGLWCIIIKWIVELSSLGFTICFSGFFLLYVDWNGLRNAKCGMGAVEYGIKPCDLAKEALHQHPLIPLTFKKAIIVGYLGIFSIYWIFCFLRFFAQLKCTLEIRQFYYNSLHVTDNEIQTMPWATVIEKVVQVQSSQQLCVVKDLSAHDMVLRLMRKENYLIGMINKGVLAFPISQWVPGVGPTVKSGPNGTQYRLILTKTLEWTLNWCILQSMFDRNFCVRMDFISNPRTLKKRLMVVGLAMLLLSPFIVIFMLVYLFLRHAEQFYNHPSTASSRRWSNLSRWIFREFNEVDHLFKHRINSSGLHASDYLKQFPSPIISITAKFISFVSGGFAAVLIIIAFLEESLLEGHIFGRNLLWYAAVFGTITAISRAAITDELLVLNPERAMSMVVQHTHYMPKRWRGKECTVNVRIEFETLFQYTGMMLLEEIASIFLTPYLLLFVVPKRVDDILQFIADFTVNVEGVGHVCSFSSFDFQEHGNSNYGSPHNAPHSRRSSWGKFEKSFLSFQSSYPSWESNAQGKQFLQNLRTFKEQKLPGHVNRYAYSPPKMWKGSPNMGSNGDRNRFISREMSHSIFETGNHLGSLWLIEANQNNHPYLLDWYYTSRPHDMTSTEVPIPNDRFDVTDRHSRVWMPSNLTQNEPGYEEYLNEYHDGRAASHLGASISAPIFRESLTQDQSSNDLPHTTRSHWWARSHYQDGPGQTSFFEPPDFNQQISYNNYFDKFSDRGSEGHHEQEQQMYRRDQHNLSRTAFTDDLEAGEFDLHFDDIYSSRPPQYPTVNSSTASF 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0829 868 MobiDBLite consensus disorder prediction 807 828 - -
Lal12g0829 868 Pfam Autophagy protein ATG9 64 557 IPR007241 GO:0006914
Lal12g0829 868 PANTHER APG9 AUTOPHAGY 9 1 860 IPR007241 GO:0006914
Lal12g0829 868 PANTHER AUTOPHAGY-RELATED PROTEIN 9 1 860 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0829 Lal-Chr12 6688090 6695037 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0829 K17907 - gmx:100809347 1393.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0829 12 6688090 6695037 Lal12g0829 12 6688090 6695037 ECH
Lal12g0829 12 6688090 6695037 Lal13g1011 13 7422758 7434722 LSH
Lal12g0829 12 6688090 6695037 Lal13g1013 13 7457269 7464087 LSH