Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0822 ATGGCTGAAGAATGTGATGGGAACTCAGTTGCAACCTCTACTTCTACACCATTAAACTGGTGGTATCTTCAGGCAAATTATGTTCCTTCTTGGAACAATAATACTAATAATGCATGGAACAACCAAACAAACCCTAATTCTTCCTCATCTTGTGAAGAGGATATATCTGTTTCTACATCATTAATCACTAATGCTTCTAACCATTCAACCCACACAGTTGAGTCTTCTCGCAGGTTTGTGGAGCCACCTGCACGTTCCTCAAATGAGTTGATGGCAGAACATGGTTCAGATAATCATCTTTGGAGCCATGTTCTATTAGGTGTTGGATCAAACAACAATCAAGAAATTGAGGAGAAGTTTGTGGATGCACTATCATCTAAAAGCATGTCAAACACCATGTTTGAAGAACCAGCCTGTGACTATTTGAAGAAACTTGATACCAATTGGGATCATCACTATAGTGACTCAACTTCATTCAACACTTTTGAGAAGCATTTAAATGGTTACAGTGATGCCATGATTGAGAATAATAATGAAAGGTTGACCAAGTTATCTAATCTTGTAACCACTTGGTCTATTGCTCCACCAGACCCAGAAGTTAATAATAATAATATTCACTTTGTTCCACAAACAACAAACAACATGTCTTTGAATTCTTCCATGGATCATTCTGGTGGAGTAATGTTCCCTAATTTCTATGGTCATGACATGAGGGTTAAGCAACAATATCATGCAAGTGAAGTTCCAGAAGCTACTGTTTTTGGAAAATCATCTAACACAAATGGGTATCAAAATGGATTTAATAGTCTTTCATCAATACAAGAGAGTGGAAAATTATACAATCTTCCTTCATACCAAAGAAATTTCTCAGATCTAATATCATTCAACAATAGGATAAGAAATAATGATGGAAAAGGAGAAGGGACCGCAGTACGTGAAGTAAAGAAAAAAAGATGTGAAGAATCTTCAGAAACAATGTTGAAGAAACCTAAGAAAGATACATCCACAGCTTCTTCTACAAAGGTGCAGGCACCCAAAGACAAGCTAGCAGACAAAATCACAGCCCTTCAGCAAATAGTGTCTCCATTTGGAAAGACTGATCAAGCATCAGTGCTGTTTGAAGCAATTGGATACATAAAGATTCTTCAGGAAGAAGTCCAGCTACTGAGCAACCCTTACTTGAAGAATAACTCACACAAGGATCCATGGGGAAGATTGGACAGAAAAGATAAGGAAGACACAAAACATGACCTTAGGAGCAAAGGTCTTTGTTTAGTCCCTACTTTATGTACTCCTCTAGCTTATAGAGAGATCAGTGGACCAGATTATTGGACACCAGCATATAGAGGATGTTTGTATAGGTAA 1365 0.3751 MAEECDGNSVATSTSTPLNWWYLQANYVPSWNNNTNNAWNNQTNPNSSSSCEEDISVSTSLITNASNHSTHTVESSRRFVEPPARSSNELMAEHGSDNHLWSHVLLGVGSNNNQEIEEKFVDALSSKSMSNTMFEEPACDYLKKLDTNWDHHYSDSTSFNTFEKHLNGYSDAMIENNNERLTKLSNLVTTWSIAPPDPEVNNNNIHFVPQTTNNMSLNSSMDHSGGVMFPNFYGHDMRVKQQYHASEVPEATVFGKSSNTNGYQNGFNSLSSIQESGKLYNLPSYQRNFSDLISFNNRIRNNDGKGEGTAVREVKKKRCEESSETMLKKPKKDTSTASSTKVQAPKDKLADKITALQQIVSPFGKTDQASVLFEAIGYIKILQEEVQLLSNPYLKNNSHKDPWGRLDRKDKEDTKHDLRSKGLCLVPTLCTPLAYREISGPDYWTPAYRGCLYR 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0822 454 PANTHER TRANSCRIPTION FACTOR BHLH111 32 440 - -
Lal12g0822 454 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 32 440 - -
Lal12g0822 454 CDD bHLH_AtbHLH_like 346 390 IPR045239 -
Lal12g0822 454 MobiDBLite consensus disorder prediction 305 335 - -
Lal12g0822 454 MobiDBLite consensus disorder prediction 300 344 - -
Lal12g0822 454 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 333 382 IPR011598 GO:0046983
Lal12g0822 454 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 346 398 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0822 Lal-Chr12 6576593 6581272 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0822 44 454 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G31050 35.000 1.71e-45 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0822 - - lang:109341031 761.911
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0822 12 6576593 6581272 Lal13g0978 13 7105192 7112498 LSH