LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lal12g0803	ATGTTGGAAATGGAGAAGGATTTTGATTCCAAGTTGAAGATTCAAGGGGATTCTTCTTCCAATGGTGGTGGTGGGAATATACAGAGATCAAAGAGTTTTGCTTTTAGGGCTCCTCAGGAGAATTACTCTATTCAGGACTTTGAATTGGGCAAGATCTATGGCGTTGGCTCATATTCTAAGGTAGTGAGGGCAAAGAAGAAGGATACAGGAACAGTGTATGCATTGAAGATTATGGACAAAAAGTTTATTACTAAAGAGAATAAAACTGCTTATGTGAAGTTGGAACGCATAAAAAGTCGTTTAACAGAAGCCGAGGCACGATTCTATGCAGCTGAAGTTGTGGACGCTCTTGAATACATACATCATTTGGGATTAATACATCGAGATATAAAGCCAGAGAACTTATTACTTACAGCTGAAGGACATATCAAAATAGCCGATTTTGGGAGTGTAAAGCCTATGCAGGATAGCCAAATCACTGTCCTTCCAAATGCAGCATCAGATGATAAAGCCTGCACATTTGTGGGAACAGCTGCTTACGTCCCTCCAGAGGTTCTTAATTCTTCTCCAGCAACTTTTGGAAATGACCTCTGGGCACTTGGATGCACATTGTATCAAATGCTTTCTGGAACTTCCCCTTTTAAAGATGCAAGTGAATGGCTTATTTTCCAAAGAATTATAGCAAGGGACATTCGATTTCCAGATTACCTTTCTGACGAAGCAAGAGACCTCATTGACCGGCTATTGGATACTGATCCCAGCAGAAGGCTAGGTGCAGGAGCTGGTGGTTATGATGCTTTGAAAAGACATCCATTTTTCAAGGGGGTTGACTGGGATAACTTAAGGGCACAAACTCCACCAAAACTTGCTCTTGAACCGGGGACTCCCTCACCCGAGCGTGAAGATGGTCATGAGTCGTCGTGGAACCCCTCTCACATAGGGGACAGTTATGCTAGACAACTTGATGGTGCTACATCATCTTCTGAGGAGACTGGGCATATAACCAGGCTAGCTTCAATTGATTCATTTGATTCAAAATGGTATGCACAAGTCTTCCTGCAACAGTTTTTGGATCCTGGGGAATCTATTCTTATGATCTCTACAGTGAAGAAATTTCGGAAACTAACAAGCAAGAAGGTGCAGCTCCTCCTTACCAACAAACCAAAGTTAATCTATGTCGACCCATCAAAGCTAACTGGGAAGGGAGATATAATGTGGTCTGACAATTCAAATGATTTAAGCATCCAAGTGACTAGTCCCTCACATTTCAAGATTTGCACACCTAAAAAGGTAATGTCCTTTGAGGATGCAAAGCAAAGAGCATGGCAATGGAAAAAGGCAATTGAAGGGCTTCAAAACAGGTGA	1365	0.4198	MLEMEKDFDSKLKIQGDSSSNGGGGNIQRSKSFAFRAPQENYSIQDFELGKIYGVGSYSKVVRAKKKDTGTVYALKIMDKKFITKENKTAYVKLERIKSRLTEAEARFYAAEVVDALEYIHHLGLIHRDIKPENLLLTAEGHIKIADFGSVKPMQDSQITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDASEWLIFQRIIARDIRFPDYLSDEARDLIDRLLDTDPSRRLGAGAGGYDALKRHPFFKGVDWDNLRAQTPPKLALEPGTPSPEREDGHESSWNPSHIGDSYARQLDGATSSSEETGHITRLASIDSFDSKWYAQVFLQQFLDPGESILMISTVKKFRKLTSKKVQLLLTNKPKLIYVDPSKLTGKGDIMWSDNSNDLSIQVTSPSHFKICTPKKVMSFEDAKQRAWQWKKAIEGLQNR	454

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lal12g0803	454	PANTHER	3-PHOSPHOINOSITIDE-DEPENDENT PROTEIN KINASE 1	21	97	-	-
	Lal12g0803	454	PANTHER	3-PHOSPHOINOSITIDE-DEPENDENT PROTEIN KINASE 1	98	450	-	-
	Lal12g0803	454	Coils	Coil	434	454	-	-
	Lal12g0803	454	PANTHER	SERINE/THREONINE-PROTEIN KINASE	21	97	-	-
	Lal12g0803	454	PANTHER	SERINE/THREONINE-PROTEIN KINASE	98	450	-	-
	Lal12g0803	454	Pfam	Protein kinase domain	97	273	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lal12g0803	454	ProSiteProfiles	Protein kinase domain profile.	1	273	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lal12g0803	454	SMART	serkin_6	47	273	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lal12g0803	454	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	125	137	IPR008271	GO:0004672\|GO:0006468
	Lal12g0803	454	MobiDBLite	consensus disorder prediction	285	312	-	-
	Lal12g0803	454	Pfam	PH domain	354	453	IPR033931	-
	Lal12g0803	454	Coils	Coil	87	107	-	-
	Lal12g0803	454	Gene3D	Transferase(Phosphotransferase) domain 1	99	286	-	-
	Lal12g0803	454	MobiDBLite	consensus disorder prediction	1	26	-	-
	Lal12g0803	454	SUPERFAMILY	Protein kinase-like (PK-like)	33	290	IPR011009	-
	Lal12g0803	454	Gene3D	Phosphorylase Kinase; domain 1	45	96	-	-
	Lal12g0803	454	Gene3D	-	339	454	IPR011993	-
	Lal12g0803	454	SUPERFAMILY	PH domain-like	267	453	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lal12g0803	Lal-Chr12	6307063	6316351	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lal12g0803	1	454	AGC Kinase Gene Family	AT3G10540	74.245	0.0	732

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	AGC_PDK1	Lal12g0803		Pkinase	1e-42	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lal12g0803	K06276		-	gmx:100788780	764.607